Detailed information on CNT30617482


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7Y052|CALM_EUPCH, E-value = 1e-52

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673126Sesamum indicumSetaria viridis12.3145.3185.86198forward
CNT30373447Sesamum indicumArabidopsis thaliana10.8128.5783.91174forward
CNT30504265Sesamum indicumNicotiana attenuata8.6445.5785.61139forward
CNT30146219Sesamum indicumMedicago truncatula10.0164.9285.09161forward
CNT30204543Sesamum indicumHelianthus annuus6.6548.8685.05107forward
CNT30621990Sesamum indicumCajanus cajan16.4740.0384.15265forward
CNT30596276Sesamum indicumOryza meridionalis10.8131.2485.63174forward
CNT3039763Sesamum indicumMarchantia polymorpha11.530.1882.7185forward

Expression of CNT30617482

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MRFKNSGKSMVPLPSASTSLIISWSSASVGFWPRDLITVPSSLVVMQPTDEFHK*

>peptide 2 (78 aa)
MTNKYLYHKHIISTASQFSRVFHLALLLNLNYTESPSLFSILHILFFTCHFTNTSTLNMNNHTRRSITHTHSKQNIFI*

>peptide 3 (38 aa)
MKCNDEKRTRKPLHIPTLFIFFSFFFFFFSIFCIHKGF*

>peptide 4 (40 aa)
MSSTQHQYQYSQYGLIQSNQNQVAKPVPSTVSKAIALYQT*

>peptide 5 (41 aa)
MLFSFRLGAPQADYGFFQPLKFITSRHNNANKIILIQPSKK*

>peptide 6 (47 aa)
MMKSELENHYTYRPCSSFFLFSFFFFPYFVFIKVSRLTGGGDITWPS*

>peptide 7 (37 aa)
MSLKLLQMSHKAQEKGTVKSPPPFYNRSLKPPMTYKL*

Sequence

>CNT30617482
CTTACTGAATCAACCCTTACAAGAACATAAAATTCTTTCCTCACAAAGTCACAAGAAGCTTTAAGGGTGGAATGAGTCTAAAATTGCTGCAAATGAGTCA
CAAAGCACAAGAAAAAGGAACAGTGAAGAGTCCACCACCATTTTACAACAGATCATTAAAACCTCCGATGACTTATAAACTATGAAATGCAATGATGAAA
AGCGAACTAGAAAACCATTACACATACCGACCTTGTTCATCTTTTTTTCTTTTTTCTTTTTTTTTTTTTCCATATTTTGTATTCATAAAGGTTTCTAGGT
TGACTGGAGGTGGGGACATCACTTGGCCATCATAACCTTGACAAATTCTTCATAATTGATTTGCCCATCACCATCGACATCTGCTTCCCTAATCATCTCG
TCTACTTCCTCATCGCTGAGATGAAACCATTCTGATCCTTGTCAAAAACACGGAATGCCTCTTTAAGCTCCTCTTCGGAGTCAGTATCCTTCATCTTCCT
GGCCATGAGGTTCAAGAACTCTGGGAAGTCGATGGTTCCATTACCATCGGCATCAACCTCATTAATCATATCCTGGAGCTCGGCCTCAGTGGGGTTCTGG
CCCAGGGATCTCATTACAGTTCCAAGCTCCTTGGTGGTGATGCAACCTACAGACGAGTTTCATAAATAGTTAGTTAAAACAAATACTAAATGTATACAAA
ACAACAATAAAACAAAAGGCCATAATGTTATTTTCTTTCAGGCTGGGCGCACCCCAAGCAGACTACGGCTTCTTCCAACCTTTAAAATTCATAACAAGCA
GACATAACAATGCCAACAAAATCATACTGATACAGCCATCAAAGAAATAGATCATAATCTACAAACAAAGCAAGAAACAATGACAAACAAGTACTTATAT
CATAAGCATATCATATCAACGGCTTCACAGTTCTCACGAGTATTTCACTTAGCACTTCTACTTAATTTGAATTATACAGAGAGCCCCTCTTTGTTCAGCA
TACTTCATATTTTGTTCTTCACATGTCATTTTACCAACACTTCCACACTTAACATGAACAACCACACTAGAAGATCTATCACACACACACACTCCAAACA
AAACATATTCATCTAATTGTGATCCTATCAAGAACCATGAGCTCAACCCAACACCAATACCAGTACAGTCAATATGGACTAATACAGTCCAACCAAAATC
AGGTCGCGAAACCTGTTCCAAGTACAGTTTCCAAGGCCATAGCTTTATATCAAACTTGAATATAATCCTAGGTATTGAACTTCTTATATAATCAAGCTAA
GAAAATATTTCCTCAACAGCCAAGAGAACCCACATCATCTGAAGCCCCAAAACAATACCCCTCTGAACCCTAAAGTCGAGCAATTAAAAAGCTAACCCAC
GGCTATATCTAAATCAGGGGAAACGATATTTTCCAATCAAAAAGGGAATAAGCAATCAGATCTGCCCTGAAAACAAAAACCCGACATCCAAAATACAAAC
ACCCACAACCTATATACAAATAAATCACACACAACCACCCAACAGAGACATGTATAAAATTCGATAACAAGATTTATGTAAATATGGAACCGCGGTAAGA
TGAGAGAAA