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Detailed information on CNT30617438


BLAST search results

BLAST vs Swiss-Prot:
sp|Q33BX2|NU4C_NICTO, E-value = 1e-31

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30184264Sesamum indicumSecale cereale21.577.8991.11135forward
CNT30395323Sesamum indicumTriticum turgidum21.7321.8691.18136forward
CNT30610707Sesamum indicumGossypium raimondii20.4533.7788.28128forward

Expression of CNT30617438

Peptides detected in this lncRNA

>peptide 1 (36 aa)
CSDSPSSRQFKFIFLLNVREEEKAFFLSLYNEHFFQ*

Sequence

>CNT30617438
TTGTAGTGATTCACCGAGTTCTCGCCAGTTTAAATTCATTTTTTTACTTAACGTAAGAGAAGAAGAAAAAGCCTTCTTTTTATCATTGTACAATGAACAT
TTTTTTCAATGATAAGATTTTTGTTATTTTTCTTTTTTTTATGAATAAAAACTATTTATAAAAAAAATTAGATAGAATAACTTCAACCTTTTCAACTGAT
ATTGAAAGAACAAAATCAGGGTACAACCAATTCCTAGTACGGGTAAAAAAATAGAGATCGAAAGAAATAACTCTCGTGGTCCAGAATCAACAAAAAAAGA
GTTTGGAACATTAAATATCTTGTATCCATAGAACATCTATCGTAACATAGATAATAAATAAATAGAAGTTAATATCATACCAATTGCCATTACAAAAGTA
ATTAGGAGTTTTTTCATTAAAAGATATTTTGGACTAAAAGGTTTTGTTGCAAAAGACATGAAATCTTGCGATTAGGGGAGGGCATTCAAACCAAAATTTT
TAGATCACAATTCAACCCCGATAGGATTTGGGTTTAACGGGTTGGGTATTTTGTGTAAGTAATCGAGTTTGAGTAAATTCAAAGTCCGACTAAATTATAT
GGGTCACTGTGAGCTCAAAAACCTAA