Detailed information on CNT30617317


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30655263Sesamum indicumRosa chinensis95.817.6794.04319forward
CNT30713553Sesamum indicumMalus domestica golden96.147.4896.25320forward
CNT30627950Sesamum indicumDaucus carota95.874.1996.55319forward
CNT30705531Sesamum indicumPrunus avium56.7667.595.24189reverse complement

Expression of CNT30617317

Peptides detected in this lncRNA

>peptide 1 (58 aa)
PQTLVRIQCPENLRVPPQGSSTEGESGPKIRPKGVVDGQQVNIPVLPLVGPEGQSRLG*

Sequence

>CNT30617317
CCCGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCCGCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAA
GGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTGGTCCCGAGGGACAGAGCAGGCTAGGTTAACCGAAAGATGGTTATCGGTTCA
AGAACGTAAGGTGCCCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATGCCTCGAGCCAATGTTCGAGCACCAGGCGCTACGGCGCTGAAGTAACCCA
CGCCATACTCCCAGGAAAAGCAAGAGCGCTCCT