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Detailed information on CNT30616942


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A324|RR2_COFAR, E-value = 5e-68

BLAST vs NONCODE:
NONATHT002193, E-value = 4e-52

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30272039Sesamum indicumChenopodium quinoa49.3972.882.18522forward
CNT30541466Sesamum indicumBrassica napus29.0415.3785.34307forward
CNT3057337Sesamum indicumAmborella trichopoda26.027.3880.36275forward

Expression of CNT30616942

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MITLSGNSIIYLIPPKYVCKRDNCLFTTAPSLFGRQLSLLVFYSILKFLNL*

>peptide 2 (32 aa)
MNPLLEIINPINDCFGLSWKFFERKELIIFCG*

>peptide 3 (32 aa)
TSYNPFSVLMEHDRTFILPSEKQKVELYTKLF*

Sequence

>CNT30616942
ATACATCGTATAACCCTTTTAGTGTGTTAATGGAACATGATAGAACATTCATATTGCCCTCTGAAAAACAAAAAGTAGAACTTTACACAAAATTATTTTG
ATTCAACCATCTCTTTGTCTACTTGAAATAGGATATTTTGAATACCAACTAATATTTGGAATACTAACTAATCACATAATATCCTCAATTATTTTTATCT
ATTTCTCAAAGTTCATAAATAATATAATAATTGATTTCAGAAATTTATCGAATTTTTGAAGTAAAAGTGATTTATCTTATTATTAATCAAGGATTTCTAT
ATAGCTAGAACGGCCCTCACAAATTGCGAATACTAATTTGTTAAGAATTAAGCGGATTGAAGATATAGCGTCATCATTCGCTAGAATTAAAGTATCTGTA
AGATCAGGGTCACAATTTGATTAAACAAATTGTTGGAATTCCCAAAGTGATACACTTTCGTAGGGCCGTATATTCTTCATGCTGATCAACAATGATTACA
TTATCAGGTAACTCTATCATATATTTAATCCCGCCCAAATATGTTTGCAAGCGAGATAATTGTCTTTTCACAACAGCCCCGTCTCTTTTTGGAAGACAAT
TGAGTCTTCTCGTTTTTTATTCCATTCTCAAATTCCTGAACTTATGAAGTCTCATTTTTATAGTTGACCAGTTCGTTAACATCCCCCTGAGCCATTTTTT
ATTAACACAATGACACCAGGCCTTTATTGTAGCCCGTGCTACTGAATCAGCTACTTTATTTTTTGTACCAATAATCAAGAATTGTTTTCCTCCAAAAAAA
TAAGAGACAAGGAATCCTGAACTAAAATAAATAATTGTTCCAACCTTCTCTTCTACCGTAGATTGGCCGTAGATAGACGAACAAATCATTAGTCTTTTCT
ATCGCTTACTATTTTGATTCTCAAATTAAATAACTGCATCAAATGCAGATAGTTAAATGAATCCGCTTTTAGAAATCATTAATCCTATAAATGATTGTTT
TGGTCTATCATGGAAATTCTTTGAAAGAAAAGAATTAATAATTTTTTGTGGTTAAAC