« Back to Sesamum indicum search


Detailed information on CNT30616931


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677471Sesamum indicumSetaria viridis13.1823.3792.05176forward
CNT3018187Sesamum indicumZea mays13.3349.1790.45178forward
CNT30726897Sesamum indicumLupinus angustifolius14.6141.6786.15195reverse complement

Expression of CNT30616931

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MNVKDLLPSRTYDFHQIRLSAEFYMYLGNRVWNFVYSL*

>peptide 2 (45 aa)
MVYQKNECERSPSKPYIRLSSNTAFRRILYVSRKPSMEFCLLTLN*

>peptide 3 (30 aa)
MNSDRWSVPGQGRISLICYLSEGHRIFLIS*

>peptide 4 (38 aa)
MTAGSCCNFSTHLATAMKLSAYQLNFVPFFEVNLLENC*

>peptide 5 (29 aa)
MVRIGYISNHYEYLFGMSLGPLGRVKPGH*

>peptide 6 (29 aa)
DQPLLAWVKNGPYKGLFKSLGLAEDRHEQ*

Sequence

>CNT30616931
GACCAACCCCTTCTAGCCTGGGTTAAAAATGGACCTTATAAGGGCTTGTTTAAAAGTCTAGGACTAGCCGAGGACCGGCATGAACAGTGACAGGTGGTCT
GTGCCGGGCCAGGGCCGGATCAGCCTAATATGCTACTTGTCCGAAGGACATCGTATATTTTTAATAAGTTAGTTTAGTAACATTCTTGTGATATGATTAC
GACAAACATGTAGAACTGCTTTGCTCATTTTAAGAAATTTTAATGTTTGATTTGATCTAATTTAAAATTGAGAATTTTAAAATCTACTATAAAAAGAGAA
ACACAAGACAAAATTTAATGGGTAAGACCCAAACCTGACCGGATGCTTTGGGTGTAATATGGTAAGACCTAATAGGTAGTAGTCTATAGGCATGGTAAGG
ATAGGGTACATAAGTAATCATTATGAATATTTATTCGGTATGAGTCTTGGACCTCTTGGTAGGGTAAAACCCGGCCATTAACTAGCCTAATTGAGAAAGG
AGAATAACATGTATAATTACTGAGTTTTCTAAATGACATATGATTGAAACTCATTGGCATTATGAACCGAATGTATATCTTTTGGGATGCTGTTATTGCA
TCTTTAGTGATCTTTTGGAATGAATAATAATTGTATTAACTAGTTACACATCTGGTAAGCAGAGAAGTTGGAGACTGCAATATCTAAATTTTACTAGGTT
AGTGTCTAGTAAGAGAAGAGTGGATCACCTCTCTCAATGTGGCGAAGTGAGGTTCATTTGCACATCCTAAAATGAACTGCAAAAAATTGCTTGAAAGAAT
TTCATTTGTATAATATTTACCCTCTTAAAACATGGTTTACCAGAAAAATGAATGTGAAAGATCTCCTTCCAAGCCGTACATACGACTTTCATCAAATACG
GCTTTCCGCAGAATTCTATATGTATCTAGGAAACCGAGTATGGAATTTTGTTTACTCACTTTAAATTGAGTATCCGTTTCCCTCCCTTTTCTGCTAGGAT
TGGAAATCCTGTATTTTACATATCCATACGAATGAGACCTTGGGGTTTTAGCTAATGGCCATAATTTGACCAAGTAGCATAGCAACATCCATTGGCTAAT
GCTTCTTAATTGATGTTCCTCAGTAATAATGACAGCAGGTAGTTGCTGTAATTTTAGCACACACCTTGCAACAGCCATGAAACTCTCTGCATATCAGTTA
AACTTTGTTCCATTCTTTGAAGTAAATTTATTAGAAAATTGTTAACTACTCAATTTTGGTTGATACCCTTTTATTTTGAGCATACAAGAAGAGAACTCAT
CATTGTGATTCTATATTTAAACGCCACACTCTCCG