« Back to Arabidopsis lyrata search


Detailed information on CNT3061663


BLAST search results

BLAST vs Swiss-Prot:
sp|D7UPN3|RLK10_ORYSJ, E-value = 3e-10

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3079114Arabidopsis lyrataBrassica juncea27.153.3584.62104forward

Expression of CNT3061663

Peptides detected in this lncRNA

>peptide 1 (29 aa)
LQLFETFSSMREEASFLYERVDPLSSHCP*

Sequence

>CNT3061663
CTGCAGCTATTTGAAACCTTTTCCTCCATGAGAGAGGAGGCGAGTTTCCTCTACGAAAGAGTCGATCCTCTAAGCTCCCATTGTCCATGAACTCATACAC
CAAACACCCATATTCTGGACACGCACCAAGAAGAAGAACCATGTGAGGATGTCTTATGCTACTTAGAACCTCGACTTCTTGTTGAAATTGTTTCTTTCCT
TGAGCAGCATCAGAAAATGAACTTCTTCCGGTGGAGTTCCTTTGACCCTTTGCCTGCCTAAACTCATAATTGAAGTCCAATGATCCATTTGTAGGGATTT
TGTGCATCTCTCTCACTGGTTTGAAGCCCTTATTATCATGGGAATACCTCTCTGGAACTGTGTTTCTCGCATTACGCTGACCC