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Detailed information on CNT30616515

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 1e-41

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30536042	Sesamum indicum	Eucalyptus grandis	61.72	75.64	79.81	416	forward
CNT30549101	Sesamum indicum	Ipomoea triloba	27.89	31.86	85.11	188	forward
CNT30269270	Sesamum indicum	Chenopodium quinoa	71.96	92.38	80.21	485	forward
CNT30490956	Sesamum indicum	Olea europaea	44.36	71.19	85.62	299	forward
CNT30591924	Sesamum indicum	Musa acuminata	55.93	70.73	80.11	377	forward
CNT3062262	Sesamum indicum	Arabidopsis lyrata	68.84	84.67	81.25	464	forward
CNT3017147	Sesamum indicum	Zea mays	55.64	52.45	80.8	375	forward
CNT30341751	Sesamum indicum	Eragrostis tef	43.03	59.92	81.38	290	forward
CNT30150463	Sesamum indicum	Brachypodium distachyon	53.86	41.3	81.27	363	forward
CNT30584450	Sesamum indicum	Echinochloa crusgalli	60.09	54.07	80	405	forward
CNT30558075	Sesamum indicum	Panicum hallii	48.52	41.44	79.82	327	forward
CNT30335475	Sesamum indicum	Cynara cardunculus	33.23	17.24	82.59	224	forward

Expression of CNT30616515

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MTEKLGCMMERWDCKKVRLGCKMERLGCKRGMLGCMQGMLGCMQGRLGYSSEMSDCNLEM*

>peptide 2 (33 aa)
MQDLLGYIQVNWDYMLGKWGYNQGKTGCNLEMM*

Sequence

>CNT30616515
CTGTAACTTGGAGAGGACGGACTGTAAGGACTAGAAGGTGAGATCTTTGGACTTGTAGGTGAATATGCAAGAGAAGGGCTGTATCTTGCTGAAGGATTGT
AACTTGGAGATGTAGGGCTATAACTTGGTGAGGTAGGACTGTAACTTGGAGAGGTTGGGCTATAACCAGGGGAGGTCGGGCTGTAGGCAGGTGAGGTTGG
GCTATATGACGGAGAAGTTGGGCTGTATGATGGAGAGGTGGGACTGTAAGAAGGTGAGGTTGGGCTGTAAGATGGAGAGGTTGGGCTGTAAGAGGGGGAT
GTTGGGCTGTATGCAGGGGATGTTGGGCTGTATGCAGGGGAGGTTGGGCTATAGCTCGGAGATGTCGGACTGTAACTTGGAGATGTAGGACTATAACTTG
GTGAAGTCGGACTATAGCTAGGAGAAGTTGGGCTGTAGGTTGGAGAAGTAGGTGAGTAGGATGGGCTAGTTGGAGAATATGCAGGACTTGTTGGGCTATA
TCCAGGTGAACTGGGACTATATGTTGGGGAAGTGGGGCTATAACCAGGGGAAGACGGGCTGTAACCTGGAGATGATGTAGGAGAGAAGGCCATTCCACCA
ACATAAGGAGAAAACTGGGCATCTGTAACAGGAGATAACCGCAGATTTGGGCTGAGCAAATAACTTGGTGACAT