CANTATAdb - search

Detailed information on CNT30616458

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 3e-67

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3042435	Sesamum indicum	Prunus dulcis	67.71	72.11	80.96	499	forward
CNT3076593	Sesamum indicum	Brassica juncea	73.54	99.27	81.55	542	forward
CNT30341749	Sesamum indicum	Eragrostis tef	35.96	59.55	81.89	265	forward
CNT30154712	Sesamum indicum	Prunus persica	83.31	78.82	81.92	614	forward
CNT3049385	Sesamum indicum	Cucumis sativus	62.82	58.46	80.78	463	forward

Expression of CNT30616458

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MQDLLGYIQVNWDYMLGKWGYNQGKWGCNQEKWGYNQEMMGCIQERTGCNLEMM*

>peptide 2 (93 aa)
MQEKGCILLKDCNLEMLGYNQGRSGCRQVRLGYMTEKLGCMMERLGCKRVTLGCKRVKWGCKQGMLGCMQGMLGCMQGRLGYSSEMSDCNLEM*

Sequence

>CNT30616458
GGACTAGAAGGTGAGATCTTTGGACTTGTAGGTGAATATGCAAGAGAAGGGCTGTATCTTGCTGAAGGATTGTAACTTGGAGATGTTGGGCTATAACCAG
GGGAGGTCGGGCTGTAGGCAGGTGAGGTTGGGCTATATGACGGAGAAGTTGGGCTGTATGATGGAGAGGTTGGGCTGTAAGAGGGTGACGTTGGGCTGTA
AGAGGGTGAAGTGGGGCTGTAAGCAGGGGATGTTGGGCTGTATGCAGGGGATGTTGGGCTGTATGCAGGGGAGGTTGGGCTATAGCTCGGAGATGTCGGA
CTGTAACTTGGAGATGTAGGACTATAACTTGGTGAAGTCGGACTATAGCTAGGAGAAGTTGGGCTGTAGGTTGGAGAAGTAGGTGAGTAGGATGGGCTAG
TTGGAGAATATGCAGGACTTGTTGGGCTATATCCAGGTGAACTGGGACTATATGTTGGGGAAGTGGGGCTATAACCAGGGGAAGTGGGGCTGTAACCAGG
AGAAGTGGGGCTATAACCAGGAGATGATGGGCTGTATCCAGGAGAGGACGGGCTGTAACCTGGAGATGATGTAGGAGAGAAGGCCATTCCACCAACATAA
GGAGAAAACTGGGCATCTGTAACAGGAGATAACCGCAGATTTGGGCTGAGCAAATAACTTGGTGACATCATGCCGTCATGATACGGGGTTCCTGTAAGTG
GGGAACGAGCAGGTGTCATGCCAAATTCCAGGCCACC