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Detailed information on CNT30616445


BLAST search results

BLAST vs Swiss-Prot:
sp|P32764|RBS6_SOLTU, E-value = 2e-27

BLAST vs NONCODE:
NONMEST000023, E-value = 3e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512567Sesamum indicumJuglans regia22.0219.8686.7583forward
CNT30372132Sesamum indicumArabidopsis thaliana59.6834.8381.33225forward
CNT30501577Sesamum indicumCoffea canephora22.2812.8688.184forward
CNT30279728Sesamum indicumChenopodium quinoa25.7313.0990.7297forward
CNT3020310Sesamum indicumCitrullus lanatus20.9513.192.4179forward
CNT30727206Sesamum indicumCorchorus capsularis58.369.5583.18220forward
CNT3069740Sesamum indicumQuercus suber59.9524.9481.86226forward
CNT30402284Sesamum indicumBeta vulgaris25.243.3885.2695forward
CNT30525466Sesamum indicumPhaseolus vulgaris17.7722.5692.5467forward
CNT30508073Sesamum indicumNicotiana attenuata25.468.5889.5896forward
CNT30166270Sesamum indicumPistacia vera21.2212.2986.2580forward
CNT30633374Sesamum indicumCapsicum annuum25.4611.1988.5496forward
CNT3091618Sesamum indicumSolanum tuberosum25.468.388.5496forward
CNT3074985Sesamum indicumBrassica juncea21.4917.8487.6581forward
CNT30260270Sesamum indicumBrassica rapa21.4912.3588.8981forward
CNT30648517Sesamum indicumRosa chinensis57.8242.7582.57218forward
CNT30625551Sesamum indicumDaucus carota20.164.6590.7976forward
CNT3038822Sesamum indicumCucumis melo20.9517.7589.8779forward
CNT3039544Sesamum indicumMarchantia polymorpha16.4523.3190.3262forward

Expression of CNT30616445

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MKLMHWTWRTLSNPMILTKASGVCPYSLVNLQQHLGGVSAPVHGQLPHCPVTSVVVPW*

Sequence

>CNT30616445
AACAGCAATCAATTGACTTTTAGGAAGATAAAACAAGTTCGAATTGGGTACACTTGTTCTCAACAACAAACACCAAATCCATAAAAAATGGAGAGAAAAA
ACGACACAGAAAAACAAAGGTACAAGATGAGTCTCTTATGAATTTTAGTAGCCCGGTGGCTTGTAGGCAATGAAACTGATGCACTGGACTTGGCGCACGT
TGTCGAATCCAATGATTCTAACGAAGGCGTCAGGGGTGTGCCCTTACAGCCTCGTCAACCTCCAGCAACACTTGGGCGGAGTCAGTGCACCCGTACATGG
GCAACTTCCACATTGTCCAGTAACGTCCGTCGTAGTACCCTGGTGACCTGTGGTTTTCACGGTACACAAATCCGTGC