Detailed information on CNT30616412


BLAST search results

BLAST vs Swiss-Prot:
sp|Q94C25|Y5005_ARATH, E-value = 3e-49

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379990Sesamum indicumManihot esculenta6.8156.1981.06227forward

Expression of CNT30616412

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MHQSPTNNIFLAVSSCSSVMRSSNFSFLSATCS*

>peptide 2 (35 aa)
REANVKMTIGQRNKDLENFYISARSLNTKRIINIT*

>peptide 3 (39 aa)
MAGDKGGPDRNGKSSVSSMSISLLFHFEACLSQMVFGHR*

>peptide 4 (42 aa)
MFKEFAVSKTRKGEKTLVVLRQNFHWRNGDNVKEVFPRIIFW*

>peptide 5 (47 aa)
MFTWEVLLILATSLMNSSVLLSVSVKTLTATSWPLAMQALLWSERTA*

>peptide 6 (52 aa)
MQYKTSERPQTTNSILRNPKQQHSLTTKSQLSNYALYYLEDFFFSTVIQTIG*

>peptide 7 (76 aa)
MSSFALKLLSSFADIQIEYALQFPLLASLTQTETAWLLTASFSGILLSPIEYVKLKRKIVVLTTWEKKGMALGEFL*

Sequence

>CNT30616412
AAAGAGAAGCAAATGTTAAAATGACAATTGGACAGAGGAACAAAGACCTGGAAAACTTTTACATCTCAGCAAGAAGTTTAAACACAAAACGGATCATAAA
CATAACATAGATAAAGAACCTTGCATTATGCAGTATAAAACTAGTGAAAGACCACAAACTACGAATTCCATCCTGAGGAATCCTAAACAGCAACACTCAT
TGACGACAAAGTCTCAACTCTCAAATTATGCTCTCTACTACTTAGAAGATTTCTTCTTCTCAACTGTCATTCAGACCATCGGTTAGAAATGTATAACACA
TAGTAGTACTATAGTAGCATATTACAAAAGTCAGCATAATAAACTGAGATGTAAAAACTCCCAATTACCTGCAAAAGGCCGTGTAGCGTTCGGACCATCC
CTTCCGGGAGAAGTGTCAAAGCAAAAGGACAAGGTCTATTGCCACAGATACAAAGGGGTCGACCCAAGACCGAATCAAACCCGCATTGCCCGCCCAATCC
ACTGCACTTAGAACACAATCTCTCATAAGGGTCGCTATAATTCACACTAAAACCCTGCATTAGTGCTTCCCCAAGACTCAGCTACAAATCCGTGAGCCCA
TTGCTAGCGGACCTCAAAACGGGGACGCTAATAATCATTCTACAATATATAATTCTCAGAATCGGGTCATGAGGGATCGGTCCCACCAGATAATAAGAGT
CGGTAAACTTCAAACCAGGGGAATTACAGCTAAAATGATTGTAGGGTGAGGTAGGCATGGCAGAAACATTACAGCCGTAGAACAGATTGAGGTCGTCGTT
TTGGGGACCATCGTAGGAAAAAAGAGTGGAATTGAGTGTAGTGTTGTGGAATTCAGAGGGACAGGTATTATTGTAGAGGTCGGAGCGGGAGAGAATGAGG
GTCTTCTGAGGTTGATGGATTTGCAGAACTCGATAGGTGAGTGAGGTTTGAGTGGTCAACTCCGTAATGTTGTTGTCCCGACAGGTGAGTGAGAAGCCGG
GGAAGCCGCAGTGGGCGGGACGGTCACCGCCGGAGAAAGGGTAAGTGATGTTGGTAATGGGGCCGCAGGAGAAGGTGCGGTTGCAGTTTGGGTAGGTGGT
GGTGGGTTGAGAATAGGCGGCGGTGAAGAGGGTGGCGGTGGTGAGTGTGATGAGGAGCGAGGAAAGAGAGGGAGGCATTTCTTGGTGGGTGTTTGAACTT
TGAAGACCTTAAACTTGACGACATTGGCTTGGATGGAACATTTTGTTTAAATTCTTTTGCTCTTCACTGAAACAATCTTTTGTTTATTGTTACAGCAGCC
TTTCTTGACTAAGGAAATTTATAAACTCTTTTCCTTCCTTTTGATGGAGAACCAGCAAGTGTGAAAAGATGTTTAAAGAATTTGCTGTGTCCAAAACGCG
CAAGGGAGAAAAGACTTTGGTGGTATTAAGACAAAATTTTCATTGGAGAAATGGAGATAATGTTAAAGAGGTTTTTCCAAGGATTATTTTCTGGTGAGCA
GATGACTAAAATGATTATACAAATAGTTCAGTGATCGGTGAACATGGGCAGCTGAGTCACGCTGCAACCTGCATGGGTACACAGTTATGTTCTGGTCATC
AGCAGCCGAAGAGAATTCGGAAAGGTTGAAATCCAACATATAGGTTGTGATGGAAAGAAAAGTTTTACGAATGGTGTCCCACAGGTCTTCATCAATGTTG
GTAGGATGTCGATGAGATCGATGTACAGGAAGGGAACATCACCTATGCAATCGAGCTGGGAGCAGTGATAGCCTCAGGGGAGGCTGGTTGCCCGTTGCCT
CCCCAGAATGGATAGCCTGTTGCCATGATCTGAGTTAGCATTATCCTAATCCTTATGAGCAGCTTTGCACTGAAGCTGCTGTCTAGTTTTGCAGACATTC
AGATAGAATATGCCCTGCAATTCCCGCTCCTGGCAAGCCTCACTCAGACAGAAACTGCATGGCTGTTGACCGCATCGTTTAGTGGGATTCTCCTTTCTCC
GATTGAATATGTGAAACTGAAGAGGAAAATTGTGGTCCTGACAACTTGGGAGAAGAAAGGAATGGCTTTGGGGGAATTTTTATAGACTCAAGACTTCCTT
CTAACATCTCCACAACCTTAGTCATTGCTGGTCTGTCTGATGGAGCAGTCTGAATGCACCAAAGCCCTACCAATAACATTTTTCTTGCAGTTTCTTCTTG
CTCTTCAGTCATGAGATCATCTAATTTCTCGTTCTTGAGCGCAACGTGCTCGTAAATTTTGTCAGGAAAATAATCTTCACTTGATTGGATTGCCTCAATT
TTATCAAAATTTCTTGCTCCAGCCATTTCAAGAAGCATCATTCCGTAGCTATACACATCAGACTTGTGAGAAACTGCTCCGAAATTTCTGGAGAACACCT
CAGGAGCAATGTAGCCAACAGTCCCTCTTGCCCCAAGCATTGATATTATACTCTGCTTCTTCTTGAACAATTTAGCAAGCCCAAAATCAGATATTTTCGG
GCAAAACTCTTCGTCCAAAAGAATGTTCTGAGGCTTGATGTCAAAATGAACAATCCTTGTGTTGCAACCTCTGTGTAGATACTCAAGACCGCGGGCGATG
CCTACTGCAATCCCATACAATGTTTCCCAATCCAACTGACAGCCTGGATCAATTGATCCACTCTTACAGATGAACTTGTCCAATGATTTGTTTGGCATAT
ATTCATAGACTAACACTCTTTTCTTTCTGTCATAGCAAAATCCCAGTAGATTGACAATGTTTACATGGGAGGTTCTACTTATACTGGCAACTTCATTAAT
GAATTCTTCCGTGTTGTTATCAGTCTCAGTTAAGACCTTAACCGCAACAAGCTGGCCATTGGCCATGCAGGCCTTGCTTTGGAGCGAGCGAACTGCCTAG
GGGTAGCACACTGGCGGCATATGGTGGCTCACCACAAAAAGGTTTGAGCAAGGAGGAGTGAAACACAGGATGGATGCATGAACACTCTGGCAAGTCAAGT
TAGGCCACAGGTCCATTATGTGAAGAACGCAAAATAGGTTGTAGTATTGTTTTGCCAATTTCTGAGAATGGCGAGTCACCATTATCTGAGATATGGCTGG
AGACAAAGGAGGACCCGATCGCAATGGTAAAAGCTCGGTCTCGTCGATGTCGATCAGCTTGTTATTTCATTTTGAGGCCTGCTTAAGCCAAATGGTATTT
GGCCATAGATAAGATGTCTTGGCGAAGGGTTAGGGTGTTGTCAAGCAAAGTAACCAGGGGTTGGAATAGGTGACAGAAAGCCAATTGAATTGATAGTTTT
GGAAACTATTCAGCAATCTTTACTAAAGTAAT