Detailed information on CNT30616399


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 2e-34

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30700558Sesamum indicumQuercus lobata35.0692.9684.46251forward
CNT3091613Sesamum indicumSolanum tuberosum10094.7178.91716forward
CNT30237809Sesamum indicumBrassica oleracea51.466.3182.61368forward
CNT30205386Sesamum indicumHelianthus annuus43.4443.581.99311forward
CNT30713436Sesamum indicumMalus domestica golden24.0253.4284.3172forward
CNT30620243Sesamum indicumCajanus cajan30.8766.5785.07221forward
CNT30154934Sesamum indicumPrunus persica58.2490.2682.01417forward
CNT30584594Sesamum indicumEchinochloa crusgalli50.2858.2581.39360forward
CNT30551544Sesamum indicumOryza brachyantha52.2353.8182.09374forward

Expression of CNT30616399

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MTEKLGCMMERLGCKRVTLGCKRVKWGCKQGMLGCMQGMLGCMQGRLGYSSEMSDCNLEM*

>peptide 2 (33 aa)
MQDLLGYIQEKWGYNQEMMGCIQERTGCNLEMM*

Sequence

>CNT30616399
GGACTAGAAGGTGAGATCTTTGGACTTGTAGGTGAATATGCAAGAGAAGGGCTGTATCTTGCTGAAGGATTGTAACTTGGAGATGTAGGGCTATAACTTG
GTGAGGTAGGACTGTAACTTGGAGAGGTTGGGCTATAACCAGGGGAGGTCGGGCTGTAGGCAGGTGAGGTTGGGCTATATGACGGAGAAGTTGGGCTGTA
TGATGGAGAGGTTGGGCTGTAAGAGGGTGACGTTGGGCTGTAAGAGGGTGAAGTGGGGCTGTAAGCAGGGGATGTTGGGCTGTATGCAGGGGATGTTGGG
CTGTATGCAGGGGAGGTTGGGCTATAGCTCGGAGATGTCGGACTGTAACTTGGAGATGTAGGACTATAACTTGGTGAAGTCGGACTATAGCTAGGAGAAG
TTGGGCTGTAGGTTGGAGAAGTAGGTGAGTAGGATGGGCTAGTTGGAGAATATGCAGGACTTGTTGGGCTATATCCAGGAGAAGTGGGGCTATAACCAGG
AGATGATGGGCTGTATCCAGGAGAGGACGGGCTGTAACCTGGAGATGATGTAGGAGAGAAGGCCATTCCACCAACATAAGGAGAAAACTGGGCATCTGTA
ACAGGAGATAACCGCAGATTTGGGCTGAGCAAATAACTTGGTGACATCATGCCGTCATGATACGGGGTTCCTGTAAGTGGGGAACGAGCAGGTGTCATGC
CAAATTCCAGGCCACC