Detailed information on CNT30616384


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549166Sesamum indicumIpomoea triloba26.2626.3486.44177forward
CNT30559586Sesamum indicumActinidia chinensis36.6530.6185.43247forward
CNT30591949Sesamum indicumMusa acuminata47.0365.2381.07317forward
CNT30263629Sesamum indicumBrassica rapa58.6168.9480395forward
CNT30354623Sesamum indicumLactuca sativa76.2680.1978.99514forward
CNT30574226Sesamum indicumVitis vinifera57.2777.3581.61386forward
CNT30642027Sesamum indicumCannabis sativa48.3751.181.9326forward
CNT3027914Sesamum indicumTheobroma cacao29.2365.8982.74197forward

Expression of CNT30616384

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MTEKLGCMMERWDCKKVRLGCKMERLGYSSEMSDCNLEM*

>peptide 2 (40 aa)
MQDLLGYIQGKWGCNQEKWGYNQEMMGCIQERTGCNLEMM*

Sequence

>CNT30616384
GGACTAGAAGGTGAGATCTTTGGACTTGTAGGTGAATATGCAAGAGAAGGGCTGTATCTTGCTGAAGGATTGTAACTTGGAGATGTAGGGCTATAACTTG
GTGAGGTAGGACTGTAACTTGGAGAGGTTGGGCTATAACCAGGGGAGGTCGGGCTGTAGGCAGGTGAGGTTGGGCTATATGACGGAGAAGTTGGGCTGTA
TGATGGAGAGGTGGGACTGTAAGAAGGTGAGGTTGGGCTGTAAGATGGAGAGGTTGGGCTATAGCTCGGAGATGTCGGACTGTAACTTGGAGATGTAGGA
CTATAACTTGGTGAAGTCGGACTATAGCTAGGAGAAGTTGGGCTGTAGGTTGGAGAAGTAGGTGAGTAGGATGGGCTAGTTGGAGAATATGCAGGACTTG
TTGGGCTATATCCAGGGGAAGTGGGGCTGTAACCAGGAGAAGTGGGGCTATAACCAGGAGATGATGGGCTGTATCCAGGAGAGGACGGGCTGTAACCTGG
AGATGATGTAGGAGAGAAGGCCATTCCACCAACATAAGGAGAAAACTGGGCATCTGTAACAGGAGATAACCGCAGATTTGGGCTGAGCAAATAACTTGGT
GACATCATGCCGTCATGATACGGGGTTCCTGTAAGTGGGGAACGAGCAGGTGTCATGCCAAATTCCAGGCCACC