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Detailed information on CNT30616366


BLAST search results

BLAST vs Swiss-Prot:
sp|P0C073|RUB1_DESAN, E-value = 1e-57

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-84

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30513524Sesamum indicumJuglans regia50.9444.0987.76433forward
CNT30699961Sesamum indicumQuercus lobata50.1240.2688.03426forward
CNT30506303Sesamum indicumNicotiana attenuata51.0653.1287.79434forward
CNT30541492Sesamum indicumBrassica napus50.1234.1987.56426forward
CNT30234371Sesamum indicumBrassica oleracea52.2427.0186.71444forward
CNT3074284Sesamum indicumBrassica juncea52.2464.0787.16444forward
CNT30260671Sesamum indicumBrassica rapa52.2466.1787.16444forward
CNT30620193Sesamum indicumCajanus cajan52.4769.4786.32446forward
CNT30153746Sesamum indicumPrunus persica5247.9487.33442forward

Expression of CNT30616366

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MVSELSTSRVMVLPVRVFTKICICTIKTGLSVNKLTNIPNNSSHINPKPTKPTTN*

>peptide 2 (82 aa)
QDQVEGRLLLDVVVGKGATVLELFASEDQPLLVRGDSFLVLDLGLDIVNGVGAFHLKGDGLACEGSSRRSAFHHGDARPSEG*

>peptide 3 (56 aa)
MVSELSTSRVMVLPVRGLHEDLHSTTETQDQVKGRLLLDVVVGEGASVFKLLSGED*

Sequence

>CNT30616366
CGCAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCGTCCTCGAGCTGTTTGCCAGCGAAGATCAACCTCTGCTGGT
CCGGGGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTTTCCACCTCAAGGGTGATGGTCTTGCCTGTGAGGGGTCT
TCACGAAGATCTGCATTCCACCACGGAGACGCAAGACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCGTCTTCAAGCTG
CTTTCCGGCGAAGATTAACCTCTGCTGGTCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCCGAACTTTCCACCTCA
AGGGTGATGGTCTTGCCTGTAAGAGTTTTCACGAAGATCTGCATCTGTACGATCAAAACCGGCTTATCAGTAAACAAACTAACAAACATCCCCAACAATT
CCAGTCATATTAACCCTAAACCTACAAAACCAACTACCAATTAACACAACAATTAACCCCCCCCCCCCAATTAACCCCCCCCCCCCCCTTATACACAAAA
TTCAACAACCAAACAATCAAGGGGAAGCTTAATCAAAATCGGAGACTCTTCACAGAGGCCCCAATACCAAAACCAATAAATCAAAAAACCCGATTTTTCA
AATCATAACCTAAACCAGAAATCATCCAACAGGAGATCAAGCTATAGAATACACACGGATAAAGAGATCAAGAACTCGCAGCCTCACCTTGAAAATAAGA
CCTAGAGAGATATTTGGAGAAGATGATAGAGGATTGGAGAGGATTGAAAT