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Detailed information on CNT30616284


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3057972Sesamum indicumAmborella trichopoda14.1443.9986.33139forward

Expression of CNT30616284

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MFEIHIMQGDIAFANFRIEGCTPQAQVMSQITSVLVQHRECKYI*

>peptide 2 (51 aa)
FSLLVFSQQRPISSPLFKPTPSLLPPLNLQEWLPNVFGNTQNRHLLPILTL*

>peptide 3 (29 aa)
MSITPKNISGNFCDIETLVVVYFSSCFRF*

>peptide 4 (40 aa)
MASQCLWEYSKPPSSSYLDTINIISSPYVNNTKKYLWKFL*

Sequence

>CNT30616284
CATTTTCACTCTTAGTTTTCTCTCAACAGCGGCCGATTTCCTCCCCCCTCTTCAAGCCAACTCCTAGTCTTCTTCCTCCTCTTAATCTTCAAGAATGGCT
TCCCAATGTCTTTGGGAATACTCAAAACCGCCATCTTCTTCCTATCTTGACACTATAAATATTATCTCTTCTCCTTATGTCAATAACACCAAAAAATATC
TCTGGAAATTTTTGTGATATTGAAACCTTAGTGGTTGTCTATTTTTCTTCGTGTTTTCGGTTCTGAGTGAACAAAATAAGGAGTTTCTCTTGGTGAGAAA
AGAAGGAGCAACCGTGGTGGTTATTGTGGTTGCCGGCCTTTCTCGTGGCCGTATGTGACTACCTCGGATCTGTGGCTCTCTGAGCCGATATTACCGTTTT
CCTTTTACTGTTGTTTAAATTTCTATATATTTATTATCATTGTTGTATATCTTGGCCAGTATTATTAATTTAAGGGTTCAAATCCCCGAAATCTGTAATA
GTTGAATTAGGTGTTCTCGAGCTTCCGCTGAAGGGTTTTTACGCAACAGTGATATTAGAGCAAGATAATTTCACTAGCATCCTTTTTGGCAATGATGATT
GGGGAATATGAGTCGAAGCAATAACAAGAATATTTCTAGTGGAACAGCTTTCAGAGAGATATTTTACTAATAGACCGAGGGATAAGTAATTCGACTCAAT
CATATTCAGATCATGAATGTTTGAAATCCATATTATGCAAGGAGACATTGCTTTTGCTAATTTTCGAATTGAAGGGTGTACGCCACAGGCCCAGGTTATG
AGCCAAATTACCAGTGTCCTGGTCCAACATAGAGAATGTAAATATATATGACCGGTTACGCCCTTTAGACTGCGTACATCTTCTAGGCCCCTTATGGGGC
GTCCTACAAGCTAGTCCCCTTCTTTGGGCCAAATATATTTTTATGGTATCAATCTAAATCTTGAAGATAGAATTTTATATGAG