Detailed information on CNT30616211


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30185941Sesamum indicumSecale cereale27.9715.3387.77139forward
CNT30385268Sesamum indicumTriticum turgidum27.9714.4287.05139forward
CNT30263944Sesamum indicumBrassica rapa37.027.5187.5184forward
CNT303548Sesamum indicumZea mays28.579.9786.62142forward
CNT30626608Sesamum indicumDaucus carota23.5413.7688.89117reverse complement
CNT30499058Sesamum indicumDigitaria exilis28.9733.8884.72144forward

Expression of CNT30616211

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MYNGIHPHPQHLRIVEIPFFFLSLRPFYLGKIYISKIS*

Sequence

>CNT30616211
CTTAGATCCAACAAGACTTAGCCCAACTACGGATTCATCTAATCCAAATATATGTATAATGGCATACACCCACACCCTCAACATTTGAGAATAGTGGAAA
TCCCATTTTTTTTTTTATCTCTTCGTCCATTTTATTTAGGAAAAATTTATATTTCCAAGATCTCATAATTTTGATTCGTGATTGGCCAGATCATTGATAG
CAACAATATCCAAATACCAAATCCAACTTCTATATACTCCCCGCAAAGTGGAAGAAACTTTTGGAAAGGTCAAAAAAAGAACGTCTTCTTCCAACATAAG
AAATTCTTCCAATAATTCCGAGCCTAATCTTTTTAAAAAAGCACGTATAGTACTTTTGTGTTTCCGAGCCAAAGTTCTAGCACAAGAAAGGCGAAGTATA
TACTTTATTTGATACAAAGTCTTTTTATTGGAAGATCCGCTATGATAATGAGAAAGATTTCTGCATATACGCCCAAATCGATCAATAATATTCGAAT