Detailed information on CNT30616210


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 6e-44

BLAST vs NONCODE:
NONGMAT000508, E-value = 2e-54

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318271Sesamum indicumCorylus avellana23.8230.0483.22298forward
CNT30546681Sesamum indicumIpomoea triloba21.7457.8783.82272forward
CNT30703567Sesamum indicumQuercus lobata22.7856.4483.86285forward
CNT30375418Sesamum indicumArabidopsis thaliana8.5545.3483.18107forward
CNT3069058Sesamum indicumQuercus suber24.9435.6681.41312forward
CNT30197530Sesamum indicumPisum sativum22.7836.1783.51285forward
CNT30504865Sesamum indicumNicotiana attenuata16.3139.8480.88204forward
CNT30186872Sesamum indicumSecale cereale23.8259.7283.22298forward
CNT3086283Sesamum indicumVigna radiata24.3820.5281.64305forward
CNT30172429Sesamum indicumTrifolium pratense24.4647.379.08306forward
CNT30441099Sesamum indicumAegilops tauschii23.8257.7583.89298forward
CNT30256114Sesamum indicumAvena sativa23.5857.1783.73295forward
CNT30619612Sesamum indicumCajanus cajan14.7143.9183.7184forward
CNT30357929Sesamum indicumLactuca sativa21.560.0484.01269forward
CNT30644824Sesamum indicumCannabis sativa21.5828.0185.56270forward
CNT3052246Sesamum indicumAmborella trichopoda20.5421.3379.77257forward
CNT3024855Sesamum indicumPopulus trichocarpa21.8246.5180.59273forward
CNT3050826Sesamum indicumCucumis sativus7.8328.7487.7698forward

Expression of CNT30616210

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MRLTPPRRAKRRIAGLVIPWMLSLSTFLWRLAPPFPKPLPPFPLPDILYDLNEFI*

>peptide 2 (33 aa)
MIALGTIRLDLHAGKEINQVPYEFSYLLKLQLG*

>peptide 3 (33 aa)
MNLYELPTEDLPRMNLNIFNCGQYKTVIMMGYL*

Sequence

>CNT30616210
CTTTCAATAATTTGAATAAGCGTATTGGCATTGATTAATGGACAAAATGAAGATTAAAAGACAGAGCAAAAAGAAAGGGAAAATAATTTCCTGGAAGTCA
AAAGTGTAGTAGTTGGTGTCGCTGCGTCAAGATTCCAGATTTGTAGTCCAAAAGCAACAAGGGTAGTGCAGCACATCATAATATAAGGTAGTAGGAGACT
TGGGGTAGGCAGATGGCCTTCGAGTGTGTTCAAAAAGTGAAAACTTAAAATTGTATTAGCTGCCCGGATACTCATGTCAGTTTGGCCCGCCATCAAAGTT
GTGGGTCTAGTTCTCTAACCCGGCCACTATTCTTAATTGCAGGCATGAATAAAAAAGAACCTTTAGCCGGCTTCTAAAAACTATGCATAATGATTGCACT
TGGCACCATCAGGCTTGATCTTCACGCTGGGAAGGAAATTAATCAAGTGCCCTATGAGTTCTCTTATTTACTGAAATTGCAATTAGGTTAATATTAAAAG
AAATTGGAAGTTGAGCATTGTGTGAGAATCACAACAGCAATTCATCTCATTCAAGTAATAAACGACAATGGAATACAAGATCTCTTCAATCCTCTAAGTG
AACTCCTAATAATAATACCCAAACTGACTAAATCTACACAAATATCACCATATCCAATCGTAACCCTAGAAAATCCTAGCCTCCGAAACCATAAAGGGTG
CGTCCCTGCCTCTTGAGGGCATAAACCACGTCCATGGCGGTCACCGTCTTCCGCCGAGCATGCTCAGTGTAGGTGACGGCGTCACGAATGACATTCTCCA
GGAAAATCTTCAAAACACCGCGAGTCTCCTCGTAGATTAAACCGCTGATGCGCTTAACACCGCCACGACGGGCCAAACGCCGAATCGCCGGCTTGGTGAT
ACCCTGGATGTTATCCCTCAGCACCTTCCTGTGGCGCTTAGCTCCGCCCTTCCCCAAACCCTTGCCTCCCTTTCCTCTTCCTGACATTCTCTACGATCTC
AATGAATTTATATGAACTCCCGACGGAGGATCTTCCGAGGATGAATCTGAATATTTTTAACTGTGGTCAGTACAAAACGGTGATTATGATGGGATATTTA
TAGGGTTGGAGTATGGGGGTAGGACTTCACTAGAGCCGTTGGATGATGTGGAACAATCTTCGGTTGTGAGCTATGATCCGCGTTGTTTCAGTTGAACTGC
TGTGAGCCATTGATAAGACATGAATCGACGGTTTAGAGTGAACATTAACTT