Detailed information on CNT30616186


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546122Sesamum indicumIpomoea triloba74.8949.1584.97173forward
CNT30555939Sesamum indicumOryza glaberrima25.5415.1386.4459forward
CNT30146667Sesamum indicumMedicago truncatula24.6820.2187.7257forward
CNT30338628Sesamum indicumEragrostis tef25.5416.6291.5359forward
CNT30367313Sesamum indicumSorghum bicolor25.5410.3991.5359forward
CNT30646608Sesamum indicumCannabis sativa81.3940.3481.91188forward
CNT30150825Sesamum indicumBrachypodium distachyon24.689.6389.4757forward

Expression of CNT30616186

Peptides detected in this lncRNA

>peptide 1 (76 aa)
PSSSIVRVVGDNNSIVPRSSSEDPTIPNMVLNVANDGTLRNRSERQHVADNKVGLLPTVDKLSSVHTFGGDEELLLV

Sequence

>CNT30616186
CCTAGTAGTTCCATTGTCAGGGTTGTGGGAGATAACAATAGCATAGTCCCCAGAAGCTCTAGCGAAGACCCCACGATCCCCAACATGGTGCTCAACGTTG
CAAACGACGGCACCCTCCGGAATAGATCTGAGAGGCAACACGTTGCCGACAACAAGGTTGGCCTTCTTCCCACAGTAGACAAACTGTCCAGTGTACATAC
CTTCGGCGGCGACGAAGAGCTCCTTCTGGTG