Detailed information on CNT30616037


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8S8W6|YCF4_ATRBE, E-value = 2e-51

BLAST vs NONCODE:
NONMEST002992, E-value = 8e-61

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678415Sesamum indicumSetaria viridis14.7630.6885.02327forward
CNT3047368Sesamum indicumPrunus dulcis7.8123.4787.28173forward
CNT30610466Sesamum indicumGossypium raimondii9.5725.8285.85212forward
CNT30227829Sesamum indicumAnanas comosus5.3225.1191.53118forward
CNT30152456Sesamum indicumPrunus persica5.6425.9989.6125reverse complement
CNT30149719Sesamum indicumBrachypodium distachyon2.9328.5193.8565forward

Expression of CNT30616037

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MKDTYDNQLYYFSSFLSVLFLSSNLIKKEFLTNYRKIR*

>peptide 2 (93 aa)
LEQSLKKNHNHVVPPIQTLTLVPQPHRHRRRWLRRRNHGAARSPRLVAGCSWPRPHAYSRLELKIYEPRRQQKLETPNVVLYPFDRLFMRFVY*

>peptide 3 (39 aa)
MKLMQQKIPNEKYTPFLPFYRIDHNHHLHSRKLCTTNRN*

>peptide 4 (33 aa)
MLIRDLSSRSTNPAGNKSWRLRMLSSIHLIVFS*

>peptide 5 (36 aa)
MRLGPLRSKQSCFFEHEEIKKPLQLPEILGLLKAQK*

>peptide 6 (46 aa)
MWKAHQTYMKQVPSGQRHVSSLNEVDATENPQRKIYAIPSFLSNRS*

>peptide 7 (53 aa)
MGFSGDGEKYKTIYLSFLYLNLIIIIYVRRNSFYLPTFTKGRTHAFILLIEIS*

>peptide 8 (30 aa)
MLLQCVAPDKMDKKPCKIMWDVPWEEALLI*

Sequence

>CNT30616037
CTCGAACAATCGTTAAAGAAAAATCATAATCATGTTGTTCCTCCCATCCAAACTCTAACTCTAGTTCCACAGCCTCACCGTCATAGAAGACGGTGGCTGC
GTCGGCGAAATCATGGAGCTGCGCGATCGCCTCGACTAGTTGCAGGCTGTTCCTGGCCACGACCCCATGCTTATTCGAGACTTGAGCTCAAGATCTACGA
ACCCCGCCGGCAACAAAAGCTGGAGACTCCGAATGTTGTCCTCTATCCATTTGATCGTCTTTTCATGAGATTTGTATATTGAAGAAGCAAGTCGGAATTT
TGGATGTACCGAAATATTCAAAGAGCCATCAAAATTTGCCTGGTCAGATTGCTATGAAGAGCATTTTATTGTATCCTATCACCGGATTGTCTTAGTGACT
AATGGTGAGCCATGCTGCTGCAGTGTGTGGCCCCTGATAAGATGGATAAGAAGCCCTGCAAGATAATGTGGGATGTGCCATGGGAAGAAGCCCTTCTCAT
TTAATTATCCATCTGAAAAGCTTTAGGAGAGGTGAAAGCTTTGTTTGAGTGATAAAGTGCAATACAGAACAAGTATCAGAGGAAGGACAGCCACAAGCAG
TTAGAGTCTGCTCAGTTGTGCGTAAGATGTGGAAAGCACACCAGACCTATATGAAACAGGTTCCCTCAGGCCAAAGACATGTATCTTCTTTGAATGAAGT
TGATGCAACAGAAAATCCCCAACGAAAAATATACGCCATTCCTTCCTTTTTATCGAATCGATCATAACCACCACCTACATTCCAGGAAATTGTGCACCAC
AAATAGGAACTAATAAAGAGACCCGCGATCCCGTAGAAAGACATCACGATCCCTTGTGGAAAAAAAATGATTTGCTGAGACGGAACGAAAGATATCAAAT
TTCTACCAAGATAACTGGAAGTTCCAACCAATAAGAATCCTAATGAACCTAAAAAAACGATAAGGGCCCAGCAAAAATTACTTAGTTTTCGAGACCCCTT
TATAAGTTCTATCCATATATGTTCTGATCGCCAACTCATACTTGATCCGATTGCATTTTATTGGAATTGAGAGAATACCCCAAATTATTTTGACTTTACT
TTTTTTGTTTCCGAAGGAACTATCATCAACTAGCACTAGTTTGATGTGAACTAGCACTAGTTTGATGTGAACCTTTAGGAGTAATTCATCCAATTGGTTA
GATCTAAAATAATAACATACCCTTCATATGATCCCAATATACATATTGATATACATATAGATCCACCAACTTTACATTTTTTAGGCATCCAGCGATCCTG
ATCTATTTGAAACTAGCTAGAATTCATTTACCCATAGATCATTTTCTGCAGGCATAAGAGCTTTTTCCTTTATGTTCGGCGGAAATCACATGTTATACCA
TATTTCATTTCCCGAAATAAATATCTGTGTTATGCTATAAGTCTAAGTTTCAAAAAAACGGATGAGATTGGGTCCTCTCAGATCTAAACAATCTTGTTTT
TTTGAACATGAAGAAATAAAGAAGCCATTGCAATTGCCGGAAATACTAGGCCTACTAAAGGCACAAAAATAGAGGGAAAATTGAAAGTTGTCATAAAATG
GGTACCTCGATTTACTATTTGTACCTGTTATTATTTTTTTTTAATATTTTATACTAATTATAATTAAAAATTGTAATTATTATGAATTCGTAGTTATTAT
TAATTAATTCAATTTGAAAATTCTTATTAGAGATATAAGTATCTATATATCTAAGTGAGTATATAGAATAAGTCCAAGGAATGTAGAACTAAATAAATGG
ACTTATTCATCTTTCTACATGAAAGATACGTATGATAATCAACTTTATTATTTTTCTTCATTTCTTTCTGTTTTGTTCTTGTCTTCTAATTTAATAAAGA
AAGAGTTTCTTACAAATTATCGAAAGATTCGTTAGAATGCGACACAACCGGGATTTTGAGTGAAAATGGGATTTTCGGGAGATGGAGAAAAATACAAAAC
TATATATCTATCTTTTCTATATTTAAATTTGATTATAATCATATACGTAAGACGAAATTCGTTTTATTTGCCTACTTTCACGAAAGGAAGAACTCACGCT
TTTATCTTGTTGATAGAGATCTCTTAATTAGTAATCGGGAATCTAGGTAAAAAAAAAAGAGTTATCCGCAACTTTTGATTCTTTCTACAATTAGATCTTA
GGTCACCAAAGAAAAC