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Detailed information on CNT30616027


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 8e-159

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30405422Sesamum indicumBeta vulgaris42.2172.7383.19696forward

Expression of CNT30616027

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MHLLVGQGVEGSVSRTPSNTSYTGRNLSSYFYSRSNNAIAK*

>peptide 2 (40 aa)
MVSELSTSRVIVFPVRVFTKICIPPRRRRTRWSVDSFWIL*

Sequence

>CNT30616027
TTATCTTTGGCTCCACTCTAAAGTAAATTGGACCATTATCGCTGTACAAATTATCTTTGGCTCCACTCTAAAGTAAAATTAGACCATTATCACTTGTAAA
ATTACGTTCGAACGACAATCTAACACACTGATACATTAAATTTTTTGTTATATCAATTCAAAAAAATATTTATTATATATATAAAAGTACATACCACACC
ACGACTTATATTATAATAAGATAAGTAGGCCAATTAGCATACTGCGACTTATAATTGTGTTGAACCCGCTCTTTTACGGCAGCTCAATAAGATCTATTCA
TGCATCTTCTCGTCGGGCAGGGCGTAGAAGGAAGCGTCTCAAGAACTCCATCCAATACTTCCTACACTGGCAGGAATCTGAGTTCGTACTTTTACTCGCG
CAGCAATAACGCAATTGCGAAATAATCTCATTGAAGGGAAAATTCCCCCAGCCTCTTTGTCTGAGACCCTTGACGCTGAGGCTCAATTTTATTAGCAATA
AAGTTGTTTTTCCTTCAAAAGAAAACAAAAACTGAAGTCCAGGTTATAACCCAACTTGAGGCTGAAGCTCAATTTTATTAGCAATAATACTTCCTACTAG
TAGTAACTAGAAAACCCAACACATCTTAACAAAGGGACATTCGGAAAATAGAAACACAGCAAATTCAACTTGACCAAACATTTAGACCTCCATCACTTTT
TGATTGATGATACAGAGCTTTGAACCTCAGAAGTGACCACCACGAAGGCGGAGCACAAGAGTGATTGTTTTTCCAGTCAAGGTCTTAACAAAAATTTGCA
TCCCTCCCCTCAGCCGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCAGCAAGAGTTCTGCCATCTTCAAGCTGCTTACCAGCAAAGAT
CAAGCGCTGCTGGTCCGGAGGAATACCTTCTTTATCCTGAATCTTCGCCTTAACATTGTCAATTGTATCCGAACTCTCAACCTCTAAAGTGATGGTCTTT
CCAGTCAAAGTTTTGACAAATATTTGCATTCCACCCCTCAACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCCAGCGTCCTTC
CATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATTCCTTCTTTGTCCTGGATTTTTGCCTTAACATTGTCAATTGTATCTGA
ACTTTCAACTTCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCATTCCACCACGAAGCCTGAGGACAAGGTGGAGTGTAGACTCCTTT
TGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTGTCCTGGATCT
TCGCTTTGACATTGTCAATGGTATCTGAGCTCTCCACCTCAAGAGTGATAGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCATTCCACCACGAAGGCG
GAGGACAAGGTGGAGTGTCGACTCCTTCTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCA
GGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACATTGTCAATAG