« Back to Sesamum indicum search


Detailed information on CNT30615967


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-180

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30279013Sesamum indicumChenopodium quinoa33.3386.981.81121forward
CNT30525141Sesamum indicumPhaseolus vulgaris33.965.8680.351140forward
CNT30629380Sesamum indicumVigna unguiculata29.1483.981.63980forward
CNT30505570Sesamum indicumNicotiana attenuata12.6422.4786.82425forward
CNT30568725Sesamum indicumActinidia chinensis32.9895.680.71109forward
CNT3086353Sesamum indicumVigna radiata33.9353.2480.111141forward
CNT30511508Sesamum indicumSolanum lycopersicum33.1385.1784.561114forward
CNT30311152Sesamum indicumCamelina sativa33.8770.6181.31139forward
CNT30605652Sesamum indicumGossypium raimondii27.1292.4981.36912forward
CNT30622816Sesamum indicumDaucus carota33.9960.882.331143forward
CNT30642231Sesamum indicumCannabis sativa26.6184.4381.9895forward
CNT30334096Sesamum indicumCynara cardunculus33.9652.5180.471142forward
CNT30723701Sesamum indicumLupinus angustifolius20.0438.3883.53674forward

Expression of CNT30615967

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVIVFPVRVFTKICIPPRRRRTRWSVDSFWIL*

>peptide 2 (65 aa)
MPSCSSFYAQDQQNHQKNHHLNDGDSSSSSSPSYSSSFFACASILAIYLIQKSVFNFLKRKIKKK*

>peptide 3 (57 aa)
MEVEGFQKVNNMKLLKQGGRIYYQEFQPSNSSNQRKNKIQRKGKPPHFSRKRAVQLS*

>peptide 4 (53 aa)
MATFLLFFSDRFLPLPTRESSEALTSRSESEYAFLLLLLCPRSAKSSEESSFE*

>peptide 5 (41 aa)
MHLLVGQGVEGSVSRTPSNTSYTGRNLSSYFYSRSNNAIAK*

Sequence

>CNT30615967
GTCCACTAAGCTAAAGTGGTTTTCATCAAGAAGCTCATCAACCACCAGATTAAAGATTGAATAGGGCACACTTAGCAGCAGTTTAGAGTAACATTAAAAG
CACAAGACATATCACCCACTGTAGAAGCTAGTCCTCTTCATGGCGACGTTTCTGCTCTTCTTCTCAGACCGCTTCTTGCCCCTACCCACTCGCGAATCAT
CTGAAGCACTGACGTCGAGATCAGAATCTGAATATGCCTTCCTGCTCCTCCTTTTATGCCCAAGATCAGCAAAATCATCAGAAGAATCATCATTTGAATG
ATGGTGACTCATCCTCCTCCTCTTCTCCTTCCTACTCTTCCTCTTTCTTCGCCTGCGCTTCAATTCTTGCAATTTACCTAATTCAGAAAAGTGTCTTCAA
TTTCTTAAAAAGAAAAATAAAAAAGAAATAAAAAAACTACCTTCAAGGTAATCCAACTACCCGTACTGCTCAAAAGCAACATGAGATCAGAAAGTAAATC
AAAATCCAAAATACTATGAATACATGGGATGATTAATAGAAAGCAATTAGCAATGAGTTAGCTTTGTATTTACTAAGACATTTCAGCAAAAGTCCAAACG
ACAAGAATTTGTACTTTCAGTTCATTTAATTTTGGCCGCTGTACAAATTATCTTTGGCTCCACTCTAAAGTAAATTGGACCATTATCGCTGTACAAATTA
TCTTTGGCTCCACTCTAAAGTAAAATTAGACCATTATCACTTGTAAAATTACGTTCGAACGACAATCTAACACACTGATACATTAAATTTTTTGTTATAT
CAATTCAAAAAAATATTTATTATATATATAAAAGTACATACCACACCACGACTTATATTATAATAAGATAAGTAGGCCAATTAGCATACTGCGACTTATA
ATTGTGTTGAACCCGCTCTTTTACGGCAGCTCAATAAGATCTATTCATGCATCTTCTCGTCGGGCAGGGCGTAGAAGGAAGCGTCTCAAGAACTCCATCC
AATACTTCCTACACTGGCAGGAATCTGAGTTCGTACTTTTACTCGCGCAGCAATAACGCAATTGCGAAATAATCTCATTGAAGGGAAAATTCCCCCAGCC
TCTTTGTCTGAGACCCTTGACGCTGAGGCTCAATTTTATTAGCAATAAAGTTGTTTTTCCTTCAAAAGAAAACAAAAACTGAAGTCCAGGTTATAACCCA
ACTTGAGGCTGAAGCTCAATTTTATTAGCAATAATACTTCCTACTAGTAGTAACTAGAAAACCCAACACATCTTAACAAAGGGACATTCGGAAAATAGAA
ACACAGCAAATTCAACTTGACCAAACATTTAGACCTCCATCACTTTTTGATTGATGATACAGAGCTTTGAACCTCAGAAGTGACCACCACGAAGGCGGAG
CACAAGGTGAAGAGTTGACTCTTTCTGGATATTATAATCGGCAAGTGTACGGCCATCCTCAAGCTGCTTCCCAGCAAAGATGAGCCGTTGTTGATCTGGT
GGAATCCCCTCCTTGTCTTGAATCTTTGCCTTCACATTATCAATTGTATCTGAACTCTCCACCTCCAGAGTGATTGTTTTTCCAGTCAAGGTCTTAACAA
AAATTTGCATCCCTCCCCTCAGCCGCAAGACAAGATGAAGAGTTGACTCCTTTTGGATGTTATAATCAGCAAGAGTTCTGCCATCTTCAAGCTGCTTACC
AGCAAAGATCAAGCGCTGCTGGTCCGGAGGAATACCTTCTTTATCCTGAATCTTCGCCTTAACATTGTCAATTGTATCCGAACTCTCAACCTCTAAAGTG
ATGGTCTTTCCAGTCAAAGTTTTGACAAATATTTGCATTCCACCCCTCAACCGCAGCACAAGATGAAGGGTTGATTCTTTCTGGATATTGTAATCTGCCA
GCGTCCTTCCATCTTCAAGTTGTTTACCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATTCCTTCTTTGTCCTGGATTTTTGCCTTAACATTGTCAAT
TGTATCTGAACTTTCAACTTCCAGAGTAATCGTCTTACCAGTAAGAGTCTTTACAAAAATCTGCATTCCACCACGAAGCCTGAGGACAAGGTGGAGTGTA
GACTCCTTTTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGATCAGGAGGAATTCCTTCCTTGT
CCTGGATCTTCGCTTTGACATTGTCAATGGTATCTGAGCTCTCCACCTCAAGAGTGATAGTCTTCCCCGTAAGGGTTTTCACAAAAATCTGCATTCCACC
ACGAAGGCGGAGGACAAGGTGGAGTGTCGACTCCTTCTGGATATTGTAATCTGCAAGGGTTCGGCCATCTTCAAGTTGCTTTCCAGCAAAGATCAATCTC
TGCTGATCAGGAGGAATTCCTTCCTTATCTTGAATCTTGGCCTTGACATTGTCAATAGTATCAGAGCTCTCAACCTCGAGAGTGATGGTTTTGCCAGTTA
GAGTCTTCACAAAGATCTGCATCTGAAATTTAGAAAACAAAACAATAATAGAAGTGCATCAGTATAAATTTACGTGACTAAAGGCACTTCCAGTATAATT
CAGAAAAAGAGTTGGAAAATTAACAACAAAAATGAAGTAAAAGGAATGACCCTTATACATTCAAGTGCTTTAAGATCCTACATATTCAACCAGAATTCTA
TTGCACAATGACAACTAGGCACAGCCATAAGCACGTATAAGCGAATATTCTAAGGACATTCAAATGAAATGATAATGAATTGAGAAGAAGGTGAATTCAA
TAACTCGCCTGAAAAAGAAAAAAAGAAAAGAAAGTTGAATAGTCAACAAACATAGTTCGGATGGAGGTAGAAGGATTTCAAAAAGTTAATAATATGAAAT
TGCTTAAACAGGGGGGAAGAATTTATTATCAGGAATTTCAACCATCAAACTCGTCAAACCAAAGAAAAAATAAGATACAAAGAAAAGGAAAGCCTCCGCA
CTTCTCTAGAAAAAGAGCAGTGCAACTCAGCTAATAACTCATGACTTCAAACTAAAAAGATCCAGAACCATCACCTAGCATCTAGTAATGTAAAATCGCT
TTTCGAGACAACATATGATCCCTCATCCGCACGAAAATATAGGTCGGAGAGCAACAGAATTCTGACATCAAGAAACCATAACTTAAACCCTAATCGAATT
AACTAAACCAAATACATCCACAAATCATAACAAAGAGAAAACGAAAAGAGATTCAAACTAATCGATCTAAATCGAAAAGACAGAAGAAAGAGACGTACCT
TGAAGCCGGCGCGTTAGGAAACCGAAAACTTGGAGAGTTTTTCTTTGAGATAGTTAGGAAAAG