Detailed information on CNT30615873


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30712713Sesamum indicumGlycine max22.0228.4993.7596forward
CNT30627901Sesamum indicumDaucus carota42.4315.8192.97185forward
CNT30720008Sesamum indicumTriticum spelta18.3532.9288.7580reverse complement
CNT30646085Sesamum indicumCannabis sativa27.9827.9890.16122reverse complement
CNT30318962Sesamum indicumAsparagus officinalis42.898.9787.7187forward
CNT30726606Sesamum indicumLupinus angustifolius43.3516.0384.66189forward

Expression of CNT30615873

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MPKARETPSLSFLFSPPCPHTRGHGDITKGILLTFSNLG*

Sequence

>CNT30615873
GGGAGGAGATTAGTTTAATGTATTTATAAGGATGCTTTGTCATTTGATCAGTGAAATTGTCCCATAATAGTTTGGTTAGGTTGGATTTGGCTATTTCGTC
CCTCAACCCAGTCACTAAGTCAGTTTTGATACGCAATATTTCGACTTCATCAATTTAAACAGTCAACTAACGAAGAGGATCAATTTTGATGATTTTAAGA
AACACTGAGGACCTCTACCACTGAGCTAATAGCCCGTCGTGCGAGCCTCCCACTGGGAGCCCGCTATGCCAAAAGCGAGAGAAACCCCATCTCTCTCTTT
CCTTTTTTCGCCCCCATGTCCCCACACGAGGGGACATGGGGACATAACAAAGGGGATCCTATTGACTTTTTCCAACCTAGGATAATAAGCTCATGAGTAT
TGATAATATCTGACCATGTTACCAAAATTGATAAAA