Detailed information on CNT30615169


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3060682Arabis alpinaArabidopsis lyrata94.4694.1685.17290reverse complement

Expression of CNT30615169

Peptides detected in this lncRNA

>peptide 1 (99 aa)
KSDGPIGIGLSSHSGLGRPWLVILPPSRAGGGRCSVKPASRSLLHSRRQVTRTFAQAPCLNSQLGMGEPNNSPTRTQPNEINPTFHHFIVSTWITSQRY*

>peptide 2 (35 aa)
KVMVQLELAYQVIAGSEDHGSLSFHRQEREVDAAL*

Sequence

>CNT30615169
AAAAGTGATGGTCCAATTGGAATTGGCTTATCAAGTCATAGCGGGCTCGGAAGACCATGGCTCGTTATCCTTCCACCGTCAAGAGCGGGAGGTGGACGCT
GCTCTGTGAAACCAGCCTCACGCAGTCTCCTCCACTCTAGAAGACAAGTGACCCGAACCTTCGCTCAAGCCCCTTGTCTCAACTCCCAACTTGGAATGGG
CGAGCCAAATAACAGCCCAACCCGAACCCAGCCCAATGAGATCAACCCAACGTTCCATCACTTTATTGTCTCCACTTGGATCACAAGCCAACGTTACTAG
GCTCGAC