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Detailed information on CNT3061459


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SA56|PSAD2_ARATH, E-value = 1e-96

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639185Arabidopsis lyrataNymphaea colorata41.6457.1482.38244forward
CNT30515273Arabidopsis lyrataJuglans regia49.3245.0980.28289forward
CNT30376473Arabidopsis lyrataArabidopsis thaliana69.858.2696.58409forward
CNT30269143Arabidopsis lyrataChenopodium quinoa37.7128.4480.09221forward
CNT30380725Arabidopsis lyrataManihot esculenta52.0551.6981.31305forward
CNT30403648Arabidopsis lyrataBeta vulgaris39.7621.0180.69233forward
CNT30630495Arabidopsis lyrataVigna unguiculata40.9642.3379.58240forward
CNT30488386Arabidopsis lyrataOlea europaea22.3517.7783.97131forward
CNT30505774Arabidopsis lyrataNicotiana attenuata38.2346.8681.7224forward
CNT30710333Arabidopsis lyrataGlycine max66.0444.4880.1387forward
CNT3094391Arabidopsis lyrataSolanum tuberosum37.8850.881.08222forward
CNT3089114Arabidopsis lyrataVigna radiata40.9624.9579.58240forward
CNT30171560Arabidopsis lyrataTrifolium pratense38.2327.7981.7224forward
CNT30145740Arabidopsis lyrataMedicago truncatula57.6841.9981.36338forward
CNT30611231Arabidopsis lyrataArabis alpina30.3830.9691.01178forward
CNT30651207Arabidopsis lyrataRosa chinensis26.2822.7585.06154forward
CNT30477818Arabidopsis lyrataArabidopsis halleri36.0145.0998.1211forward
CNT30619829Arabidopsis lyrataCajanus cajan40.9624.3478.75240forward
CNT30358694Arabidopsis lyrataLactuca sativa48.4663.8282.39284forward
CNT30410573Arabidopsis lyrataPapaver somniferum61.4340.0481.39360forward
CNT30570681Arabidopsis lyrataVitis vinifera28.8412.3680.47169forward
CNT30113105Arabidopsis lyrataFicus carica59.7343.7580350forward
CNT30725909Arabidopsis lyrataLupinus angustifolius23.7224.7384.17139forward
CNT3049718Arabidopsis lyrataCucumis sativus52.0558.4383.61305forward

Expression of CNT3061459

Peptides detected in this lncRNA

>peptide 1 (80 aa)
WFLNFDILQIITLFASKLNFNGTNIFPNRSHVQTNTFSSWIRLLWINTIFRVKILNLTIRKHSVKLVRNLVLGSKPCPQS*

Sequence

>CNT3061459
TGGTTTCTTAATTTTGACATCTTACAAATCATAACTTTGTTTGCCAGTAAACTTAACTTCAATGGGACTAACATTTTTCCCAATAGATCTCATGTTCAGA
CCAACACCTTCTCTTCCTGGATTCGCCTTCTCTGGATAAACACCATCTTTAGGGTGAAGATATTGAACCTCACCATTAGGAAACACTCTGTAAAACTGGT
ACGTAATCTTGTACTTGGATCTAAGCCTTGTCCCCAAAGCTAAACACTGTTCTTTCCTCGCTAGCTTCAGCAGATTCGGACCTTCTCTCATGATCGCTGC
CCCTCCTGTCGGCATCTCAAAGATCTGTTCTTTTGGTGAGTTCCATGTAATAACGTAGAACTCTTCCACTTGTGCTTTACGCAGAAGACCACCGGTGCTT
CCCGCGAAGATCGGAGACGGTGTGTTTTGGTGAAGGAGAGGGATTTCGGACGGTGGGTTGTTGAGAAAAAGTGGAGTTTCTTGACGCCGGAGGTTGCGGC
GGTTGTTATGGCGGAGTTGAAGATCCCGGCGGCTTGAGTTGCCATTGTTTTTTTCTGTCTTTGTTCTCTAATGAGCAAATTGCTTG