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Detailed information on CNT30614256

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30544944	Arabis alpina	Brassica napus	43.27	25.74	85.78	225	forward
CNT30477981	Arabis alpina	Arabidopsis halleri	50.38	27.35	89.31	262	forward

Expression of CNT30614256

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MKFWGCFLVSIGSVSFIGFVFAAIVSKLFPLSDNPIIQAIQNDWYYCFLAPLTLPALLVAIYFHWLSMKFFKHA*

>peptide 2 (53 aa)
MPLGLDYRICLNKNTEILGFENEVLGMLLSEHWFCFLHWVCVCSYCLQVVSAL*

>peptide 3 (30 aa)
ASLFGNHFIDFVSFTQYMKGVSGGDTCLLD*

Sequence

>CNT30614256
GCCTCTCTTTTTGGGAATCATTTCATCGACTTTGTCTCTTTCACTCAGTACATGAAAGGAGTTTCTGGAGGTGATACATGCCTCTTGGACTAGACTACAG
AATCTGCTTGAATAAAAACACTGAAATTTTGGGTTTTGAGAATGAAGTTTTGGGGATGCTTCTTAGTGAGCATTGGTTCTGTTTCCTTCATTGGGTTTGT
GTTTGCAGCTATTGTCTCCAAGTTGTTTCCGCTCTCTGATAATCCCATAATCCAAGCTATTCAGAATGACTGGTACTACTGCTTCTTGGCTCCACTGACT
TTACCTGCACTACTGGTCGCTATTTACTTTCATTGGCTTAGCATGAAGTTTTTCAAGCACGCATGATAATGTCAAGTAGCAATATCTTACTTACTCCATT
GTAGGATTTTGAGTGACGAATTTTGGTTTCCTTTTACATTATGAATCTAAATGTCACAGTAGCTAATACAAGTTGATTTTGGCATATGTATGACACAAGA
GGGTGATTATGTTAATGCAG