Detailed information on CNT30614218


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3020493Arabis alpinaCitrullus lanatus47.1517.6883.88273forward
CNT30637620Arabis alpinaCapsicum annuum45.9413.8585.71266forward
CNT30588719Arabis alpinaMusa acuminata35.5848.3683.5206forward
CNT30312278Arabis alpinaCamelina sativa52.5100.3393.42304forward
CNT3053016Arabis alpinaAmborella trichopoda46.6329.2882.59270forward
CNT30116376Arabis alpinaOryza nivara40.5943.2886.38235forward

Expression of CNT30614218

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSLTAKRPNGGYSMKVSTTIGLVGVILTIPASPFFKNLGSFSISLPERLSILVKISVNLTAM*

Sequence

>CNT30614218
CTAGATGATGAAAATAGCAACTTAATGAAGCTGAAGAACAAAGACAATGAAATTTAACTCGCAAAGAAACTCTAAAAAGCAAAATTATCCAGAAACTGCA
TAATTGAAAACCATAATAAGTCTCAGAGGTATCCAAAAAGGAGGTAGAGAGAAGAAATGTCGCAGAAAATAAAAGAAAAAAGAGGCTCAAACGCCATTAA
AGTTTCAAACCAAAGAAAACCATAACAGAGTCGATCATAACGAAAGTCTCATCATTTAGCTCCCTTCTTCACTGCAGCCTTGGTCACCTTGGCTCCGGTT
GGGTCCTTCTTGTCCACACTCTTGATAACACCAACAGCAACAGTCTGCCTCATGTCCCTAACAGCGAAACGACCCAATGGAGGGTACTCCATGAAGGTCT
CAACAACCATAGGCTTGGTTGGAGTCATCTTAACCATACCAGCATCACCATTCTTCAAGAACTTAGGCTCCTTCTCGATCTCCTTACCAGAACGCCTGTC
AATCTTGGTCAAGATCTCAGTGAACTTGACTGCAATGTGAGAGGTGTGGCAATCGAGAACTGGGGCGAGAGAGATCGGA