Detailed information on CNT30613376


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508073Arabis alpinaNicotiana attenuata32.5312.0683.7135forward
CNT30319672Arabis alpinaAsparagus officinalis34.4627.8888.11143forward

Expression of CNT30613376

Peptides detected in this lncRNA

>peptide 1 (47 aa)
ITFLFLSYDDSPVLITTRKIMIKMKKKKYRNYIFINQTFDNPIENVS*

>peptide 2 (62 aa)
MELSIGEAWGLVGDETDALDLTGVVESDDPNEAWGLVGDETDALDLTGVVESDDPNEGTRVLL

Sequence

>CNT30613376
TAATAACCTTTTTGTTTTTAAGTTACGATGATTCCCCTGTTCTAATAACCACCCGAAAAATAATGATAAAGATGAAGAAGAAGAAGTATAGAAATTACAT
ATTCATAAATCAGACATTTGACAATCCGATAGAAAATGTCTCATAAACAGAAATCCAAGAAAGAAAGAAAAAAACAGACAATTGGGAACGAAAGAGTAGA
GATTATTATACGGATATTTTAGAAATGGAATTAAGCATCGGTGAAGCTTGGGGGCTTGTAGGCGATGAAACTGATGCACTGGACTTGACGGGTGTTGTCG
AATCCGATGATCCTAATGAAGCTTGGGGGCTTGTAGGCGATGAAACTGATGCACTGGACTTGACGGGTGTTGTCGAATCCGATGATCCTAATGAAGGCAC
CAGGGTACTCCTTCT