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Detailed information on CNT30613101


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 1e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3074853Arabis alpinaBrassica juncea43.5544.2692.96270forward
CNT30573704Arabis alpinaVitis vinifera30.6524.3380.53190forward

Expression of CNT30613101

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MELSIGEAWGLVGDETDALDLTGVVESDDPNEGTRVLLLALLHFLQHLSGVGASEQGKLPHCPVTSIVVSGR*

Sequence

>CNT30613101
ACTACCTAACATCAAAAGATATGTTTAAGTAATCTTAATATGAAATCTAACTTTCTGGATATCTAAATATTAAGCATATAGTAGGTTACCATGATTCCCA
TGTTCTAATAACCTTTTTGTTTTTAAGTTACGATGATTCCCCTGTTCTAATAACCACCCGAAAAATAATGATAAAGATGAAGAAGAAGAAGTATAGAAAT
TACATATTCATAAATCAGACATTTGACAATCCGATAGAAAATGTCTCATAAACAGAAATCCAAGAAAGAAAGAAAAAAACAGACAATTGGGAACGAAAGA
GTAGAGATTATTATACGGATATTTTAGAAATGGAATTAAGCATCGGTGAAGCTTGGGGGCTTGTAGGCGATGAAACTGATGCACTGGACTTGACGGGTGT
TGTCGAATCCGATGATCCTAATGAAGGCACCAGGGTACTCCTTCTTGCACTCTTGCACTTCCTTCAACACTTGAGCGGAGTCGGTGCATCCGAACAAGGG
AAGCTTCCACATTGTCCAGTAACGTCCATCGTAGTATCCGGGCGATGAAACTGATGCACTGGACTTGACGGGTGTTGTCGAATCCGATGATCCTAATGAA
GGCACCAGGGTACTCCTTCT