Detailed information on CNT30613065


BLAST search results

BLAST vs Swiss-Prot:
sp|P13951|RBS_SINAL, E-value = 8e-47

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3039544Arabis alpinaMarchantia polymorpha17.830.4588.8981forward

Expression of CNT30613065

Peptides detected in this lncRNA

>peptide 1 (47 aa)
ITFLFLSYDDSPVLITTRKIMIKMKKKKYRNYIFINQTFDNPIENVS*

>peptide 2 (76 aa)
MELSIGEAWGLVGDETDALDLTGVVESDDPNEGTRVLLLALLHFLQHLSGVGASEQGKLPHCPVTSIVVSGHQGTPS

Sequence

>CNT30613065
TAATAACCTTTTTGTTTTTAAGTTACGATGATTCCCCTGTTCTAATAACCACCCGAAAAATAATGATAAAGATGAAGAAGAAGAAGTATAGAAATTACAT
ATTCATAAATCAGACATTTGACAATCCGATAGAAAATGTCTCATAAACAGAAATCCAAGAAAGAAAGAAAAAAACAGACAATTGGGAACGAAAGAGTAGA
GATTATTATACGGATATTTTAGAAATGGAATTAAGCATCGGTGAAGCTTGGGGGCTTGTAGGCGATGAAACTGATGCACTGGACTTGACGGGTGTTGTCG
AATCCGATGATCCTAATGAAGGCACCAGGGTACTCCTTCTTGCACTCTTGCACTTCCTTCAACACTTGAGCGGAGTCGGTGCATCCGAACAAGGGAAGCT
TCCACATTGTCCAGTAACGTCCATCGTAGTATCCGGGCACCAGGGTACTCCTTCT