Detailed information on CNT30611972


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LK36|SAHH2_ARATH, E-value = 1e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639595Arabis alpinaNymphaea colorata37.3918.8686.5289forward
CNT3096327Arabis alpinaSolanum tuberosum28.578.5597.0668forward
CNT3084173Arabis alpinaVigna radiata32.7711.2188.4678forward
CNT30144739Arabis alpinaMedicago truncatula38.6619.8389.1392forward
CNT30312478Arabis alpinaCamelina sativa48.7447.5493.1116forward
CNT30365573Arabis alpinaSorghum bicolor37.3925.2186.5289forward
CNT30354796Arabis alpinaLactuca sativa36.9716.7389.7788forward
CNT30570586Arabis alpinaVitis vinifera31.9311.0192.1176forward
CNT3026679Arabis alpinaPopulus trichocarpa31.516.3286.6775forward
CNT30103950Arabis alpinaOryza rufipogon36.1325.1584.8886forward
CNT3065844Arabis alpinaSelaginella moellendorffii37.3925.592.1389forward

Expression of CNT30611972

Peptides detected in this lncRNA

>peptide 1 (31 aa)
RDLTSHQHMKHNINHILGTREHQSLASGKAS*

Sequence

>CNT30611972
CAGAGATCTTACAAGCCACCAACACATGAAACATAACATCAACCACATTTTGGGAACAAGAGAGCACCAGTCTCTTGCATCTGGTAAAGCCTCTTAACAC
CAGTGGTAGTCTCCTCAGAAACACCAACAAGTCTCTCCTTCATTTTGTGGTACTTCTTGGGATCAACTTGAAGACCATCTTTGATAATAGACAAGACAAT
CTGAAACTCAGGATTATCCGTAGAAGTAGGATCAGGAA