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Detailed information on CNT30611328


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 9e-43

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317753Arabis alpinaCorylus avellana35.5323.2880.86162forward
CNT30546681Arabis alpinaIpomoea triloba24.7824.0484.96113forward
CNT30701199Arabis alpinaQuercus lobata39.2516.2482.68179forward
CNT30375418Arabis alpinaArabidopsis thaliana28.5155.0887.69130forward
CNT30617135Arabis alpinaSesamum indicum35.3116.0581.99161forward
CNT3069058Arabis alpinaQuercus suber37.2819.4382.35170forward
CNT30198310Arabis alpinaPisum sativum32.0218.586.3146forward
CNT30712284Arabis alpinaGlycine max39.9138.7285.16182forward
CNT3042757Arabis alpinaPrunus dulcis32.6824.5985.23149forward
CNT3086283Arabis alpinaVigna radiata38.611.8484.09176forward
CNT30172429Arabis alpinaTrifolium pratense41.6729.3788.95190forward
CNT3059678Arabis alpinaArabidopsis lyrata39.9137.8491.21182forward
CNT3082467Arabis alpinaBrassica juncea44.0828.0384.58201forward
CNT30261175Arabis alpinaBrassica rapa39.9138.5686.26182forward
CNT30211420Arabis alpinaHelianthus annuus44.340.7383.17202forward
CNT30619612Arabis alpinaCajanus cajan32.0234.8486.3146forward
CNT30360323Arabis alpinaLactuca sativa35.314681.99161forward
CNT30414711Arabis alpinaPapaver somniferum38.618.4185.8176forward
CNT30644824Arabis alpinaCannabis sativa39.0418.4682.02178forward
CNT3052246Arabis alpinaAmborella trichopoda30.0411.3781.02137forward
CNT3024855Arabis alpinaPopulus trichocarpa26.120.2782.35119forward
CNT30325970Arabis alpinaAsparagus officinalis30.720.2983.57140forward
CNT30331117Arabis alpinaDioscorea rotundata39.9119.2280.22182forward
CNT30496126Arabis alpinaDigitaria exilis20.1813.5382.6192forward
CNT3050826Arabis alpinaCucumis sativus29.173986.47133forward

Expression of CNT30611328

Sequence

>CNT30611328
GAAAATGATAACACGGATTACAGAAACAAGAAACTCCCAAACTTGAACAAACCCTAATACCCAAATCCTAAAAGAACCACCGTAGATCTCGATTAACCAC
CGAAACCGTAGAGAGTACGTCCTTGCCTCTTCAAAGCGTAAACAACATCCATTGCAGTCACCGTCTTCCTCCTCGCGTGCTCTGTGTAGGTAACAGCATC
ACGAATCACGTTCTCGAGAAAGATCTTAAGAACACCTCTAGTCTCTTCGTAGATCAGACCACTGATACGCTTCACACCACCTCTACGAGCAAGACGACGA
ATCGTCAAATTTTCCAGAGAAGAAGACAAAAGTTGGGAAAGGGGTACGAGTCGCGTCAGTCTCTCTCTCAGATTTCCTCATCATCTCCTTGGATCGTCGT
CTGATCTAGGTTTTTGGGGAGAATGGCAACTACGATAAGAAACTTGAAGATAAAAA