Detailed information on CNT30611156


BLAST search results

BLAST vs Swiss-Prot:
sp|Q93ZC5|AOC4_ARATH, E-value = 1e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317088Arabis alpinaCorylus avellana23.499.5885.7170forward
CNT30703372Arabis alpinaQuercus lobata20.8114.4287.162forward
CNT30375412Arabis alpinaArabidopsis thaliana68.1229.6485.22203forward
CNT30540238Arabis alpinaBrassica napus41.6129.1185.48124forward
CNT3061212Arabis alpinaArabidopsis lyrata67.4536.0984.58201forward
CNT30113588Arabis alpinaFicus carica37.9217.9182.3113forward

Expression of CNT30611156

Peptides detected in this lncRNA

>peptide 1 (98 aa)
GQSRLSFRRRFHIFRRLNMFSGKLDSSFEDARATSDCKKRVFVSQIRSLYGYVTVITEVEAVRSFESISFLLRNVLDQNAESCCDSHAFCEVSGVEFVG

Sequence

>CNT30611156
GGGCAGAGTCGCCTGAGCTTCCGGCGCCGGTTTCACATCTTTCGACGGCTCAACATGTTTTCCGGTAAGCTCGACAGCTCCTTCGAAGACGCCAGAGCCA
CCAGTGATTGCAAGAAACGTGTCTTCGTAAGTCAGATACGGTCCTTGTACGGATATGTGACCGTAATCACCGAAGTAGAAGCTGTAAGAAGCTTCGAATC
GATCTCCTTTCTTCTCAGGAACGTGTTGGATCAAAACGCAGAGTCCTGCTGTGATTCCCACGCGTTTTGTGAGGTCTCCGGTGTAGAGTTTGTTGGTG