Detailed information on CNT30611074


BLAST search results

BLAST vs Swiss-Prot:
sp|Q00874|DR100_ARATH, E-value = 4e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
nothing found

Expression of CNT30611074

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MRLVQFARESGTVPVMLLIWSWRLRRLERLPMSIGVSPSR*

>peptide 2 (39 aa)
MIGPQVPVLEEISVRLTYCLQISSLLEICRSEPSKGNRR*

>peptide 3 (45 aa)
MAKFYNVSYSQVSFSILVFLQKAHEGMFGHPFIYVIIYTYIDSLN*

>peptide 4 (43 aa)
MAAKLFNLISQAGISPFNLHPPMPNTLSLGNPSGAINSSQILC*

>peptide 5 (32 aa)
DNLTSSLALKLISSPIITRRKQDREEEEEKEN*

>peptide 6 (33 aa)
MCFWKSIKLTSCGYWPFESVVRNIEIGYEMKAC*

>peptide 7 (47 aa)
MTRLSGESLSQVIPSQEQQSKNEFQFRGEAEEEMFPENHSRVSLSCG*

Sequence

>CNT30611074
TGATAATCTGACAAGTTCTTTGGCTTTGAAGCTCATTTCCTCACCAATCATCACGAGAAGAAAACAAGACAGAGAGGAAGAAGAAGAAAAAGAAAACTGA
AAACTTCTTGTCAATACCAGAGGTGACCAAGGGAAATAGTCAGGCAAGAGTCACCAGACCGAAGCAAGCTTCTTGTGATCTTGTCAATACCATAGTTGAC
CAAGGATTTGCTTTGTAATGAATAATGGCAAGAACGAGTTGGAGACATGAGAAAGGCAAGTCGAACTATTTCAGTTGTTTGATATTTTCTTAATTATAAA
AATCCAAAATCCTTGAAGATTTCTCTCTTCTACTTGTTTTAGTTTTGATTTTCTTACTTGCAAATGGCCAAATTTTATAATGTAAGTTACAGCCAAGTTA
GTTTTAGTATTTTGGTTTTCTTGCAAAAGGCACATGAGGGTATGTTTGGTCACCCCTTTATATATGTAATTATATATACATATATAGATTCTTTGAACTA
AAACTTTCATATTGTAAAAATTTTGCAAGGTGAAGTGAAAACTAAAGTTCTAAAGTAGCAATGATGTAAGAGAAGGGTGTATCTCTTTAACGGTGTAAGC
AATGTTACTTTGGATCTGGACCCGAATGTCTGGCATTGGCTATTGATCCAACAATCAATACACTAGTACAATCAGAGAATGTGATTCTTGACCGGAGAAA
ACTCTAAATTCGATTTCTTCTCCATAGAGAAGAAATCTATCCTTTTGAATTTAGCTCCTCTATCATCTCCAGTAAAAGCATTAGGCCGTCCAGCCATTAG
ATCACACCAACATAGCAACGGAGTACCAGTAAAATCAAACTGAAGCAGGTGGCTGGGTTGGAGCATTGCTGGAAGCCAGCAAGAAACCACCAAACAAGAA
GGGGTTTCCTTCGAAATGTGCTTTTGGAAAAGTATCAAATTGACCTCCTGTGGGTATTGGCCCTTCGAGAGTGTTGTTCGCAACATTGAAATAGGATATG
AAATGAAGGCTTGTTAGCGACCAAGGGATTTTGCCAGATAAATGATTGTTGGACAGATCAAGCCTCTCTAAGTTGGTGAGGTTCGACAACTCATTTGGGA
TGCTGCCAGAAAAACCGTTATGAGAAAGCTCGAGGACATGAAGCACCTTTAATTGGCCAACCTCAACAGGCCTTTTGGGACATCAGAGCTCTCAGTCGAA
AGATTTCCTTCGGCAGCTCTCCTGAAAGAAGATTATCCGAGAGATCGATGTAGAAAAGGTGGGGAAGAGTTCCCAACCAACCAGGAATTGACCCTGCAAG
TTGATTGTGGGATAAATCCATGGCTGCTAAGTTGTTCAATTTGATCAGCCAAGCTGGTATTTCACCTTTCAATCTACATCCACCAATGCCAAATACTTTG
AGTTTGGGGAATCCATCTGGGGCAATTAACTCTTCGCAAATTCTTTGTTAAGAGGAGAGTAGATAGTTTCCTGCAGCCCTGCAAAATGCTGAGAGCGCCT
GTGATGTTCATCAGGTTATTGTCTGAAAGAGACATGAATGATAGGGCCTCAAGTTCCAGTACTTGAGGAGATATCTGTCCGGTTAACTTATTGCTTGCAA
ATCTCATCGCTGTTAGAGATTTGTAGGAGTGAACCCTCCAAGGGAAATCGCCGCTGAAGCTATTGTTTCCGAAATCTAGAATGCTAAGGTTCTGAAACCG
GGAAAAGTCGAGGTCTGTTAAGGTTCCTTCCAGCCTATTAAGCCTCAAATTCAACTTTATGAGATTAGTACAATTTGCCAGAGAAAGTGGGACTGTACCA
GTGATGTTGTTGATATGGAGCTGGAGGCTTCGCAGGCTTGAGAGATTACCTATGTCCATTGGTGTTTCTCCTTCGAGGTGATTGGAGTAAAGGTCAAGCG
ACGTTAGTCTCTTGAGTCGGGTGATGTTATTATCAATCTTTCCAGTAATTTGATTGGCTGGCAGAAAGAGTTGCTCAAGCTCGGACAGATTATAGATATC
ACTTGGGATTTCACCAGAGAGATTGTTGAAACCTGTTCGTAGAACATTTAGCCTCAAACAACTGCCTAATCCTTCGGAAATAGAGCCGCTAAAACCGTTG
TAGGAGAAATCCAGTTTGCTGAGCTGTGGTGAACTCGTGCACATGAACGAAGGAATTGGTCCTGTGAAACTGTTGCTGCTGACATTGAAACTGGTCAAAT
TGAAAGCTCCCTGTAAAAAACTTGCTTGACAGATCAATGGTCTGAATTGGGAAGACTATGTTGGTTCCATTTCCAAATGCTTGTTCAAATGGCAGCTCAC
CACTGAAGCTGTTGTAACTAAGGTCAAGAACTATGAGCAGATCAAGGGCTGAGAGAAAACCCGGTGGGAGAGGACCCGAGAGACGGTTATGAGAAAGATT
GAGTTGTGAGAGATGATGGAGGTGGAGAAGAGACACAGGGAGTTTGCCGTATAGTCCTCTAAAGGGCAAGGAGATTACAATGACTCGACTATCTGGTGAA
TCATTATCGCAGGTTATTCCTTCCCAGGAGCAACAATCAAAGAATGAATTCCAATTCAGAGGAGAGGCAGAAGAAGAAATGTTTCCGGAGAACCACAGTA
GAGTTTCTCTGTCTTGCGGGTAAGTGAAGTTCTCTATCAGTTCGATCTGGGTAAGTGAAGTTTTTATTGTTGATGAGGAGTAATTTTCCAATAGTATCTA
GATGAAACATGTTTGGTGTTAGAAGATGGTCATGTTATAACTAAAATAGAAACATGGAGGAAAGAAGATGACCATATAGATTTTCGTTGAGATCTGCTAA
TTTTCCAAACTCGACGAAAGAAGGGATTCTAAGCTTTTGCATGAAGCGATCAACCACAATAACCTCATCAAATTTGTTTCCTGTGTGAATTTAAGTATAA
ATTTGTGAGGAGATACTATGTAGTTGGTCTTATTGTCAACGACCAAATTTTTTTGGATCTTATAGATTACATGAGACTTTAGATAGGAGCCAACTCGGTT
AGGGTCAATGAATCCTTGGATTACAGTTCAAGGCATTAATTCTATAGATTCATGTAAGAAAGTATTTAGAGTAAGTTAAAGACTTGATTGACACATCATA
AGTATATTGGTAAATAAATGTTAC