Detailed information on CNT30610707


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617438Gossypium raimondiiSesamum indicum33.7720.4588.28128forward
CNT30184264Gossypium raimondiiSecale cereale60.4213.3988.65229forward
CNT30221821Gossypium raimondiiHordeum vulgare60.4218.3886.9229forward
CNT30395323Gossypium raimondiiTriticum turgidum77.3147.1186.35293forward
CNT3017910Gossypium raimondiiZea mays77.3112.1585.32293forward
CNT30231113Gossypium raimondiiAnanas comosus29.5514.8385.71112forward
CNT3055427Gossypium raimondiiAmborella trichopoda71.59.8285.24271forward

Expression of CNT30610707

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MPGNAREAMDKILNIVNILGIETAISPISSR*

Sequence

>CNT30610707
GCAACAAGTAATAAAGTGAAACAAATAACTTTTGTGGTCCAGAATCAAAAAAATAAGAACTTGGAGCATTAAATAGCTTGTATCCATAGAACATTTGACG
TGACATAGATAATGAATAAATAGGAGTTAATATCATTCCAATTGCCATTACGAAAGTAATTAGTATTTTTGGCATTAAAAAATATTTTTGGCTGGTAATT
ATTCCAAAAAAGACTATCAATTCTGCAACAAAACCACTCATGCCCGGTAATGCAAGAGAAGCCATGGATAAGATACTGAACATCGTAAATATTTTGGGAA
TCGAAACGGCCATTTCGCCCATTTCGTCGAGATAAACAAGACGCATTCTATCATAACTCGCTTTTTGCAAGAAAAAAAG