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Detailed information on CNT30610498


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2L914|PSAI_GOSHI, E-value = 2e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3047368Gossypium raimondiiPrunus dulcis22.2418.5986.13137reverse complement
CNT30152456Gossypium raimondiiPrunus persica17.0521.8385.71105forward
CNT30149719Gossypium raimondiiBrachypodium distachyon7.6320.6193.6247reverse complement

Expression of CNT30610498

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MKLKSIYLVGPYMRLYKGDDFRSKQFDEFLLKVHIKIILVDESYFENKKSKVKFFLLFSQFE*

>peptide 2 (34 aa)
MTIFSRFLSIFVPLVGLVFSDNCNGFFIFVCSKN*

Sequence

>CNT30610498
GATATACTTAGTATTTAGATATAATTAGTATAATATAAGAATTATAATATAATCGTTATAATATATATTTCTAACTAAACAATATAACAATAACATGTAC
AAATATTAAATTGAGGTACCCATTTTATGACAATTTTCAGCCGTTTTCTCTCTATTTTTGTGCCTTTAGTAGGCTTAGTATTTTCCGACAATTGCAATGG
CTTTTTTATCTTTGTATGTTCAAAAAACTAAGATTTTTTAGATTTGATGTGGCCAAGACCAAGTCTTATCTATTTTTTTTCTAAGACTTAGATGTCATAG
ATACCTATTTAGTAGAATATTGTATAACATCCGGCTTACCTGAACCGAACATAAATGAAAAAGCCTACGTAAACATGATATAGGGTTAAATGAATTATAG
CAAGTGGATCGGTACCGAACAAATGTATGAAATTAAAGTCTATATATCTAGTAGGTCCGTATATGCGATTATATAAAGGGGATGATTTTAGATCGAAGCA
ATTTGATGAATTCCTTCTAAAAGTTCATATCAAAATAATCTTAGTTGATGAGAGTTACTTCGAAAACAAAAAAAGTAAAGTCAAATTTTTTTTATTGTTC
TCTCAATTCGAATAAA