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Detailed information on CNT30610466


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2L913|YCF4_GOSHI, E-value = 1e-73

BLAST vs NONCODE:
NONMEST002992, E-value = 4e-73

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677978Gossypium raimondiiSetaria viridis30.2117.2682.26248forward
CNT30616037Gossypium raimondiiSesamum indicum25.829.5785.85212forward
CNT3018021Gossypium raimondiiZea mays30.336.4280.72249forward
CNT30354656Gossypium raimondiiLactuca sativa42.5112.2283.67349forward
CNT3058960Gossypium raimondiiAmborella trichopoda34.8414.0483.57286forward
CNT30323690Gossypium raimondiiAsparagus officinalis34.5911.1382.75284forward
CNT30726954Gossypium raimondiiLupinus angustifolius53.9616.6886.68443forward

Expression of CNT30610466

Peptides detected in this lncRNA

>peptide 1 (36 aa)
QGNGPLAIDFHIKDTTSINTLFNFYPDELNIFHKES*

Sequence

>CNT30610466
GTCAAGGGAACGGGCCCTTGGCCATTGATTTCCATATAAAGGACACAACGAGCATAAATACCCTCTTTAACTTCTATCCTGATGAACTGAATATCTTTCA
TAAGGAATCGTAGAAAGATGTAACGATTTTTTCTAGGAAAACCCTAACTAAAAATACATAGTATTCCCTCCTTTCTATCGAATCGATCATAACCACTGCC
TACATTCTAAAAAATCGTGTACCACAAATAAGAACTAATAAAGAGGCTTGCGATCCCATAGAAAGACATCACGATTCATTGTGGAAAAAAAACTATTTGC
TAAGACGGAAATAAAGATATCAAATTCCGACTATGATAACTAGAAGTTTCAACTAATAAAAACCCTAATGAACCAAAAAAAAAAAAGATAAAGGCCCAGC
AGAAATTGCTTGTTTTTCGAGATCCCACTTTAAATTCTATCCATATAGATTCTGATCCCAACTCATACATACTAGATCCAGTTACATTTGATTCGAATTG
AGAGAATAACCAAAAAAATTCGACTTTACTTTTTTTTTTCCGAAGTAATTCTTATCAACTAATACTATTTTGATATGAACTTTTAGAAGGAATTTATCAA
ATTGCTTCGATCTAAAATCATCCCCTTTATATGATCGCCTATATGGATCTACTAGATATATAGATTTTAATTTCATACATCCGTTTGGTACCGATCCACT
TGTTATAATTCATTTAACCCTATACCATGTTTACGTATGCATAAGAGAGACTTTTTCATTTATATTCAGTTCAGAGAAGTCGGATGTTATACAATATTCT
ACTAAATAGGTATCCATGACA