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Detailed information on CNT30610209


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518453Gossypium raimondiiJuglans regia10.3121.8383.82136reverse complement
CNT30730492Gossypium raimondiiCorchorus capsularis9.5551.2292.06126forward
CNT3047211Gossypium raimondiiPrunus dulcis8.8722.1684.62117reverse complement
CNT30622544Gossypium raimondiiCajanus cajan11.331.9184.56149reverse complement

Expression of CNT30610209

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MEISKLEQLRKSICDIEIERIRFKLFSNQKEKLLELVKLFRSKVYRAGINCSCDYLIEKKEREKMACCCHF*

>peptide 2 (33 aa)
MSKPTTFRYVEKKVFFAQHPLFYYNLSFCWVVM*

Sequence

>CNT30610209
GAGAAAATGTGATTCTTGCTTTTGATTTTTAATGATTTCTTAAGATTGGCACTCGAACTACTGTGAGATTGTTAGATCTATTCTATCGAGTTATTTGATC
TATCGAGTTATTTGAAGATGCACGGTAGATTCAAAAAGATTAGTTTATTTGTGTTATTTATAATATTCGTGATATTATTAGTATTTTCATAATATTATTA
ATGATATTCTTTTTATTTTATTAGAACTGAAAAGTTTAATTAGAATGGAAAAGTATAATAAAAGTTTAAAATATATATTGCATTCGGACAATCATACAAT
ATGGGATAGTTTGAATTCTTATTGAGGCTTTTTCTTCCTAAATTATTTATTTATTTCATATAGCATATAGAAGGAAATTGATTTCATATAGAAAGTATAG
ATAGATTACTATGTATCGACTGAACCAATGACTATTCATGATTCCATAATTGAATCAATGCTTCAAACTAGAGGATTGTTATGGTAAAACTTTGTTTGAA
ACGATGTGGTAGAAAGCAACGTGCGACTTGAAAGACATGATCAGCTGTGGATGTCAAAACCCACCACTTTCCGTTATGTAGAAAAGAAGGTGTTTTTTGC
TCAACATCCTTTGTTCTATTACAATTTGTCTTTTTGTTGGGTTGTAATGTAAATAGTACAGGATGGAGCTCGAAGAGAAACATTCATTTTTTAAGGGCAA
GGATCTAGGGTTAGTTAATGGAAATCAGTAAGTTGGAACAACTTCGTAAGTCTATTTGTGATATAGAAATCGAAAGGATCCGATTCAAACTATTTTCAAA
TCAAAAAGAAAAGTTGTTGGAATTGGTAAAACTCTTTCGATCAAAAGTGTATCGTGCGGGAATTAATTGTTCATGTGATTATTTGATAGAAAAAAAAGAG
AGAGAAAAAATGGCATGTTGCTGCCATTTTTGAAATGATTAAATATCACCGAAGTAATGTCTAAACCCAATGATTCAAGGCAAAGATAAAAGATCCTAGA
ACAAGGAAATACCCTTTTTCCATTTTCTCAACAACTAGATTAAAATGAAGAATCGAAATAGATTCTAAGCGAGACAAACAAAAAAGGGGTTAGAGACCAC
TCAATAAAAGAATGCCTAAGGATTTTTTTTGAGCATTTTGAGAGTTGTTTGACTTCAGTTATGAGGGTACGAATGCTTTTTTCTTATTCTTTTTTTTGAA
AAAAAAAGATGGGGTTAAATGTCTAATTGATTTGCTGGTTTAAGGATCTTTTTGACATTTTAATTCCATACATTATAATTCCATACATAGACATAACTTT
TATTTAATCATTTTTTTCT