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Detailed information on CNT30610017


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 7e-55

BLAST vs NONCODE:
NONMTRT001605, E-value = 2e-45

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30709869Gossypium raimondiiGlycine max82.3245.2386.67270forward
CNT30646148Gossypium raimondiiCannabis sativa76.5261.5288.05251forward

Expression of CNT30610017

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGQSYHLGTMGQSLHRVVHRQYGNPRRLPSR*

>peptide 2 (33 aa)
TPTNKNMNKTNPFSLSKFTFRGQSWWHRPKHCC*

Sequence

>CNT30610017
ACACCAACAAATAAAAACATGAACAAGACAAATCCCTTTTCACTCTCTAAGTTCACTTTCCGGGGACAAAGTTGGTGGCATAGGCCCAAGCATTGTTGTT
GACTGGGTCAGCAAGACCCAATGGGTCAAAGCTACCACCTGGGTACAATGGGTCAGTCACTTCACCGAGTGGTCCACCGGCAATACGGTAACCCTCGACG
GCTCCCATCAAGATAACTTGGCAAGCCCAGATGGCCAAAATGCTTTGAGCATGGATCAAGCTTGGGTTACCCAAGTAGTCAAGTCCACCCTCACTGAAGA
TTTGAGACCCGGCCTTGAACCATACAGC