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Detailed information on CNT30609476


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30395374Gossypium raimondiiTriticum turgidum23.2816.6284.09176forward

Expression of CNT30609476

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MRLWIQCLNKFYITGGPRNRLLLGYKRRR*

>peptide 2 (87 aa)
SFLQYKTYSAAILSYKSRLLFSLVIYNIFLLYFFILTKNVLCVYGYNVSISFTSQVVQETDFCLGTREEDREERGEDHGGAMEANSQ*

>peptide 3 (36 aa)
FLFSNTRPILPQSSLISHDFYSLWLYIIYFFSISLF*

>peptide 4 (33 aa)
MMKKKVKGLEKKMILFDHCTLLVSGNEIIANLE*

Sequence

>CNT30609476
TTTCTTTTCTCCAATACAAGACCTATTCTGCCGCAATCCTCTCTTATAAGTCACGACTTTTATTCTCTTTGGTTATATATAATATATTTCTTCTCTATTT
CTTTATTTTGACCAAAAATGTTCTATGCGTTTATGGATACAATGTCTCAATAAGTTTTACATCACAGGTGGTCCAAGAAACCGACTTTTGCTTGGGTACA
AGAGAAGAAGATAGGGAAGAGAGAGGAGAAGATCACGGTGGTGCAATGGAGGCCAATTCACAATAAGAGGTCGAGAGTCGAAACAATGACAAAATGACAG
GTTGATCAAGAAAACAACTGCTTAGGATGACTTTAGGGTGCTAGAGAATCGATCCTTTTTTCCATCGTTTGCTAGGGAATTTATAGGAGATCTCCTCTTA
TCTGTTAGTATGATGTGCTAAGATATACGTTCAGTCTCGCTAAATGCGTAAAATATAATCATGGACGTGTATCATGGAGATTTATTAATATAGGATTCTT
TTACCTAAACAGACTCCTTATTGTCTTGAATGTGCATTTTCACTAGGAGTTAAATAGACTCCCACATGATGAAAAAAAAAGTAAAAGGTCTCGAGAAGAA
AATGATCCTATTTGACCACTGTACATTGCTAGTATCAGGAAATGAAATAATCGCGAATCTTGAGTAACTGGCCAAGCCGCCAAAGTCGCTAAAGTGGTGA
TAAATCCTGTTAGTAAAATGAGCCCTACAGAAAGTCCATCTATTCCCAATCTCCAG