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Detailed information on CNT30608663


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-101

BLAST vs NONCODE:
NONTPRT002153, E-value = 9e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019442Gossypium raimondiiCitrullus lanatus58.9753.8985.34457forward
CNT30620193Gossypium raimondiiCajanus cajan58.9771.1885.56457forward
CNT3066364Gossypium raimondiiSelaginella moellendorffii58.8460.1684.87456forward

Expression of CNT30608663

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVMVLPVKVLTKICIPPRRRRTRWRVDSFWML*

>peptide 2 (52 aa)
MVSELSTSRVMVLPVRVLTKICIFGELIEKRFKKSLNRSALDGERGGEAMLI*

>peptide 3 (35 aa)
MEREGVRRCLYRREGVDFLRLEGLEETRKLRSDESA

Sequence

>CNT30608663
GCAGATACGAAATCACCAAACTTTTATTCCAAACAGAAGGTTTACTTAGATTAACATGTTACATTCAGAGATAAGAAAATAGGCACTTTCCTAAAGGCTT
ATTTGTGACCATCTTAAGCTAGAACAAAGACAGAAGAAGAATTAACTTCTCACTGCCCACCACGGAGACGAAGAACAAGGTGAAGGGTGGACTCTTTCTG
AATGTTATAATCAGCTAAAGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGGCGGGATCCCTTCCTTGTCCTGAATCTTC
GCCTTTACATTGTCGATGGTGTCCGAACTCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTGACGAAGATCTGCATACCCCCACGAAGACGGA
GGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGG
TGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACG
AAGATCTGCATCTTTGGAGAGTTGATTGAAAAAAGATTTAAGAAGAGCTTGAATCGGTCTGCGTTGGATGGAGAGAGAGGGGGTGAGGCGATGCTTATAT
AGAAGAGAGGGTGTGGATTTTCTTAGGTTGGAAGGTCTGGAGGAAACGAGAAAATTGCGGTCAGATGAGTCGGCG