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Detailed information on CNT30608559


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 2e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Gossypium raimondiiNymphaea colorata74.7757.1481.861141forward
CNT30528288Gossypium raimondiiEucalyptus grandis58.4566.5784.75892forward
CNT3044330Gossypium raimondiiPrunus dulcis58.1972.6184.01888forward
CNT30169882Gossypium raimondiiPistacia vera74.6455.2184.111139forward
CNT3096920Gossypium raimondiiSolanum tuberosum6988.1281.21053forward
CNT30568725Gossypium raimondiiActinidia chinensis73.6696.981.491124forward
CNT30311152Gossypium raimondiiCamelina sativa74.7770.7481.331141forward
CNT30228911Gossypium raimondiiAnanas comosus58.5257.3586893forward
CNT30716337Gossypium raimondiiMalus domestica golden68.5584.4282.71046forward
CNT30624049Gossypium raimondiiDaucus carota74.8455.4481.71142forward
CNT30355893Gossypium raimondiiLactuca sativa74.7768.8281.771141forward
CNT30704854Gossypium raimondiiPrunus avium74.6463.8884.021139forward
CNT30324534Gossypium raimondiiAsparagus officinalis67.6380.6981.11032forward
CNT30120587Gossypium raimondiiCitrus clementina74.7785.6681.771141forward
CNT30595410Gossypium raimondiiEragrostis curvula73.2681.9681.571118forward
CNT30111644Gossypium raimondiiFicus carica74.6479.93821139forward
CNT30334103Gossypium raimondiiCynara cardunculus74.8456.6782.841142forward
CNT3050995Gossypium raimondiiCucumis sativus68.5593.9882.61046forward
CNT30114615Gossypium raimondiiEutrema salsugineum58.0690.3283.07886forward

Expression of CNT30608559

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MRRCWSGGMPSLSWILDLTLSMVSELSTSRVMVLPVKVLTKICIPPRRRRTRWRVDSFWML*

>peptide 2 (54 aa)
MEREGVRRCLYRREGVDFLRLEGLEETRKLRSDESACSYVSHTVVFLRLAYATC*

>peptide 3 (52 aa)
MVSELSTSRVMVLPVRVLTKICIFGELIEKRFKKSLNRSALDGERGGEAMLI*

>peptide 4 (40 aa)
MVSELSTSKVMVLPVKVFTKICIPPRRRRTRWRVDSFWIL*

>peptide 5 (40 aa)
MVSELSTSRVMVLPVKVLTKICIPPRRRRTRWRVDSFWML*

Sequence

>CNT30608559
GCAGATACGAAATCACCAAACTTTTATTCCAAACAGAAGGTTTACTTAGATTAACATGTTACATTCAGAGATAAGAAAATAGGCACTTTCCTAAAGGCTT
ATTTGTGACCATCTTAAGCTAGAACAAAGACAGAAGAAGAATTAACTTCTCACTGCCCACCACGGAGACGAAGAACAAGGTGAAGGGTGGACTCTTTCTG
AATGTTATAATCAGCTAAAGTCCTCCCATCCTCCAATTGCTTGCCAGCAAAGATGAGCCTTTGCTGATCTGGGGGGATACCTTCCTTGTCCTGAATCTTT
GCCTTCACATTGTCAATTGTATCCGAACTTTCCACCTCCAATGTGATTGTTTTCCCAGTCAATGTCTTAACGAAAATCTGCATGCCTCCACGAAGCCTCA
AAACAAGGTGAAGGGTCGATTCCTTCTGGATGTTATAATCAGCCAAGGTCCTCCCATCCTCAAGCTGCTTCCCTGCAAAGATCAAACGTTGTTGGTCTGG
CGGGATCCCTTCCTTGTCCTGAATCTTCGCCTTTACATTGTCGATGGTGTCCGAACTCTCCACCTCCAAGGTGATGGTCTTGCCGGTCAAGGTTTTCACG
AAGATCTGCATTCCCCCGCGAAGACGGAGGACGAGGTGGAGGGTGGATTCCTTCTGGATATTATAATCGGCCAGGGTACGGCCATCTTCGAGCTGTTTGC
CGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATGGTGTCGGAGCTCTCGACTTCGAGGGT
GATGGTCTTGCCGGTTAAGGTTTTGACGAAGATCTGCATACCCCCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAATCGGCC
AAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATAAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTGTCTTGAATTTTAGACTTCACATTATCGA
TGGTGTCGGAGCTCTCGACTTCGAGGGTGATGGTCTTGCCGGTTAAGGTTTTGACGAAGATCTGCATACCCCCACGAAGACGGAGGACAAGGTGGAGGGT
AGATTCCTTCTGGATGTTGTAATCGGCCAAGGTACGGCCGTCCTCGAGCTGTTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGTGGGATGCCTTCCTTG
TCTTGAATTTTAGACTTCACATTGTCGATGGTGTCAGAACTCTCAACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTTTTGACGAAGATCTGCATCTTTG
GAGAGTTGATTGAAAAAAGATTTAAGAAGAGCTTGAATCGGTCTGCGTTGGATGGAGAGAGAGGGGGTGAGGCGATGCTTATATAGAAGAGAGGGTGTGG
ATTTTCTTAGGTTGGAAGGTCTGGAGGAAACGAGAAAATTGCGGTCAGATGAGTCGGCGTGCAGTTACGTTAGCCACACGGTGGTGTTTCTAAGATTGGC
CTACGCAACTTGCTAATTCATTCTCG