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Detailed information on CNT30608392


BLAST search results

BLAST vs Swiss-Prot:
sp|A0ZZ93|TI214_GOSBA, E-value = 4e-34

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730320Gossypium raimondiiCorchorus capsularis21.52.1394.269forward
CNT3062643Gossypium raimondiiArabidopsis lyrata25.861.8485.5483forward

Expression of CNT30608392

Peptides detected in this lncRNA

>peptide 1 (29 aa)
FLSLELKEIRIRNSRRWLGDKIFSGTNKS*

>peptide 2 (31 aa)
MIFVFIFSHFLMSCNKFIKMIFINIVFSWYL*

Sequence

>CNT30608392
ATTTTTATCCCTTGAATTGAAAGAAATTCGAATTCGCAATTCTCGCCGGTGGTTAGGGGATAAAATATTTTCAGGAACAAACAAATCATAATGATTTTTG
TCTTTATTTTCAGTCATTTTTTGATGTCTTGCAATAAATTCATAAAAATGATTTTTATCAATATAGTTTTTTCTTGGTATCTTTGATTAATTTGGTGTTT
ATTTTTATGAACCAACAAAATACTTATAGTTTGATATAGAATAAATTGTCCATCATTTTTTACCGACAGACGAACTGGATCGATAATCAATATTCCTTTT
TTCATTAGTTCTCTAACACTT