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Detailed information on CNT30607759


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09WV7|YCF2_MORIN, E-value = 0.0

BLAST vs NONCODE:
NONBRAT004795, E-value = 2e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677123Gossypium raimondiiSetaria viridis13.1451.3781.93393forward
CNT30617222Gossypium raimondiiSesamum indicum9.0699.6391.51271forward
CNT30591166Gossypium raimondiiMusa acuminata15.2523.2789.47456forward
CNT30229354Gossypium raimondiiAnanas comosus6.7530.793.07202forward
CNT30627097Gossypium raimondiiDaucus carota11.968.5994.1356forward
CNT30687250Gossypium raimondiiTriticum urartu10.7336.6485.67321forward
CNT30622146Gossypium raimondiiCajanus cajan22.5347.391.99674forward
CNT3057972Gossypium raimondiiAmborella trichopoda8.1977.5391.43245forward

Expression of CNT30607759

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MDRDIPPCIKKFLFIHVVMTRTLFPFIYLEW*

>peptide 2 (34 aa)
MYVIKLVSCIRIKCKTILVTIYLFSYTRHDTYII*

>peptide 3 (37 aa)
MYQKIFVYPCCNDKNSLPFYLLGMVIHKHTGPSYLDN*

>peptide 4 (37 aa)
MDRSSIDPGLNIDLISKTKMKNSPIKKPSVRKIPHSI*

>peptide 5 (39 aa)
MNEFFSIKPKISPFFECEFYRSIIIIPVILIYTMILSSL*

Sequence

>CNT30607759
TAATGAGTAATAGCTCTGGTTGTTCGCTATTCAATAATTCTTGTTTAGGCAGTTCATACCATCCATACATAGTGTTTTGATCTAAGATTTCAATTCTTCC
ATGTTTCAGTAGTAGCATATTGTTTCATGGAGCTAAGGTCCAAAATATGGAAGAAACAGGTGTTTCCACAACTCTACCACCCAATCCCTTCCACTTAATC
CCTATTTCATGACCACATATCTTTCCGGCTAAGTAATGGGAAACCTTCTCCTCTTACATGAATCCAATTTTCATTTCATCCGGGAAAAAGCCATCTTTTT
TCTCTAACAATGTCTTTGTCATTTTGATCCAATAGCCCTTCATTAGATAGGAACAAATTTGATAAATACTGATAACTCTCGGATGGAGTATTAGAACGGA
AAAATCCATTAGATAATGAACTACTGGTTCTAAGTCATCTCTGGTGATGAACTATTGCTTTTCTTCATATAGATAGATATAGGATCTAAGGGGCAATTAC
TTAGAAGTACATTTTGTACAACATCTCTTCCTATCTGATAGAAAAGGATCCCATGATCCTGAACTGATCGTACCTGGGATCGCAAATCCAAAGTTTGTCT
ATGAAGAGCATATCTAATTGTATTAGTGTCTATAATTGATTTCTTCTGTGTAATACTAATCGATAGGGCCTCATTGGTAAGTGCTACAAGATCTCGTGCA
TTGGAACCGACGGTTATGGACCCGAATCCATTAGTATGGAACATTTTCTTTTCCAAGTGAAATCCCTTAGTATATGAAAGAGTGAAAAAGTGACTTCGTT
GTTGTGGAATAAGAAGTCTTCGTATCTTAATACATGTATTTAATTTATTCGGGACTATTAGAGTGGGATCCACTTTTTGGGGAATATGATTCGAAGCAAT
AACAAGAATATTTCTAGTGGAACATCTTTCACAATCCTTGGAGAGATAGTTCATTAATAGACCGAGGGATAAGTAATTCTCCTCATTCACATCCAAATCA
TGAATGTTTGGAATCCATATTATGTAAGGAGACATTTCTTTTGCTAGTTCAAATCGAAGGGTGATATAAAATCGGTCTATTTCCGACATCATATCCATAG
TTAACGCATTCATCATAGTTAGAAGCTCCAGCTCCATATCAAAGTCACGATCAATAGCGTCACTAGCATCAATATCATCACTATCATCACTATCATCAAT
ATCGATATCATCAATAAGAAAACCTTTAAGCTTGTTATCCAGGAACTTGTTCAGAAATACTGTAATGAAAGGAACATAGGAGTTTGTCGCTAGGTATTTG
AACAAATAGGATCGTTCGGTTCCTATAGAACCTATCACTAAAATACCCCTAGAGGGAGATAGGGCTAAGTGGAGCGAAAAGGGTTTTCCACGAGACGGGA
AATGAAAACAATTAGCCCCACACGAAGTTTGTGAATAAGTGATTTTCTGATAATGAGCAAGGAATATCCGCCTTTCTGCTAAACATGATGTATTGAACTC
ATAATTTATTAGATACTTTTTATGAATGTCAACTAAGTATCGTAAGTAAATTGGTCCCGGTTGTTCAATCATTTGATAACCAGAGTCATTCTTTGATAAA
TGATCACTATGAGTCAGACTCAATAGAATTTGATCAATCCTTTTTTCTATCGTTAAGGTGGAGAACTGAACCAAGAATTCTCTTTCTTATCATCAACCGA
ATCACTATTCCTGAATATCCAACTCACCAATTAATTCTTTATAACGTATTTTATTTGTCTTTGATAAATAAGATAGCAGTCGTTGATGTTTTCCTAGAAT
TTTACGTAAACCTCTCTGAGATAAATAGTCTTTTTTGTACAATTCCAAATGTGAACTAAGTCTTCGTATCTTATTAGTGAAACTAACTATTTGAAATTCA
ACAAACCCCCTGTTTTCTTCTTTTTTTCTTGAAAAATAACTGAGATGAATGAATTTTTTTCCATAAAACCAAAAATTTCCCCTTTTTTTGAATGTGAATT
TTACAGATCAATAATAATAATACCAGTCATTTTGATATACACGATGATTTTAAGCTCGTTATGAATTTTATCATTTTTTTCAAATAAAATTAGTCAATCC
GGGTTTCGATTTGATTCGTATAGGGATACAAAAGAGTGAAATATTTCTACAAAAGAGAAAATTTGAGAGTTCAAATAAGACGATTTTGTTGATTCATTTG
TCGATCTAATTGATATGTATGTCATTAAATTAGTATCGTGTATCAGAATAAAATGTAAGACAATCCTTGTGACCATCTATTTGTTTTCATATACCCGGCA
CGATACATACATAATATAGGGGAAAATGTACCATTAAAATGGACCATTAAAAGTATTTTAAAATTAAAAAATAAAAATAAAAAATATATATTTATTCGGC
CCGGCTCGGGCCAAAAAAATGGTGCCCGAGGCCCAGCCCGTTTTTTAAACAGGCCTCGTTTTTTTGCCCAAGCACATATTTCGGGCCTATATTTTTACCC
GAACCCTCCCATATTTCGGGCGGGCCGTCGGGCCGGGCCGGGCCGGGCCATGGACAGGTCTAGTATCGACCCAGGACTCAATATCGACCTTATTTCTAAG
ACAAAAATGAAGAATTCTCCAATTAAAAAGCCTTCTGTGCGAAAAATTCCCCATAGCATCTAGGATATCGCCTTCTCCTAGATAATTATGGATAGGGATA
TCCCTCCATGTATCAAAAAATTTTTGTTTATCCATGTTGTAATGACAAGAACTCTCTTCCCTTTTATTTACTTGGAATGGTGATCCATAAGCATACGGGT
CCCTCTTATCTTGATAATTAATAGATTTATATGATAAAAAATCATATCCATAGTGTTTTTTAAAATTAGATTTTTTATATTTTTGTTCTTGATTCAGTTT
ATATTCTTGAGTCAGTAATGAGTTCGCTTGAAAATCATTTTTTTCGTACTGAATTAATCTTTCTTTTTCATCTGAATCCCATTTTGTTAAA