Detailed information on CNT30607757


BLAST search results

BLAST vs Swiss-Prot:
sp|O64963|PAL1_PRUAV, E-value = 3e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317648Gossypium raimondiiCorylus avellana32.3116.3884.2195forward
CNT30727763Gossypium raimondiiCorchorus capsularis65.9924.2281.44194forward
CNT30162471Gossypium raimondiiPistacia vera33.3311.7982.6598forward
CNT3095942Gossypium raimondiiSolanum tuberosum29.936.882.9588forward
CNT30225206Gossypium raimondiiHordeum vulgare23.4732.2485.5169forward
CNT30139541Gossypium raimondiiLolium perenne20.415.9586.6760forward
CNT30113881Gossypium raimondiiFicus carica53.7414.7180.38158forward

Expression of CNT30607757

Peptides detected in this lncRNA

>peptide 1 (42 aa)
LKSIAWQSATKYVEDISFKISTASARCKGRQCMRKHIRGPRL*

Sequence

>CNT30607757
CTTAAATCGATAGCTTGGCAAAGCGCCACCAAGTATGTGGAGGACATAAGCTTTAAGATATCAACGGCCTCGGCGCGCTGCAAGGGTCGTCAATGTATGA
GAAAACATATTCGTGGTCCACGGCTTTGAGTAAGTCCTTTTCGCAGAACCGCGAAGGGTGAAGCTCGCCGTTGGGACCGGTCGTGAGGGTCTTCTTAGCG
ACTTGGCTCACGATGTTCTTTACCGTGTTCTTTAAGTTTTCTTCTAAGTGTCTTAAATCGATAGCTTGGCAAAGCGCCACCAAGTATGTGGAGG