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Detailed information on CNT30607385


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT001706, E-value = 5e-39

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695659Gossypium raimondiiOryza sativa17.922.585.71189forward
CNT30617775Gossypium raimondiiSesamum indicum18.182987.5192forward
CNT30198866Gossypium raimondiiPisum sativum18.2859.286.01193forward
CNT30136937Gossypium raimondiiLolium perenne17.929.9185.71189forward
CNT3017926Gossypium raimondiiZea mays17.949.4886.24189forward
CNT30153780Gossypium raimondiiPrunus persica18.2821.5687.05193forward
CNT30331679Gossypium raimondiiDioscorea rotundata14.7722.7787.82156forward
CNT30150659Gossypium raimondiiBrachypodium distachyon5.424.3689.4757forward
CNT30115844Gossypium raimondiiOryza nivara17.921.785.71189forward
CNT3049028Gossypium raimondiiCucumis sativus16.8661.3887.08178forward

Expression of CNT30607385

Peptides detected in this lncRNA

>peptide 1 (30 aa)
GLRHQGKLLEPLLSHPTCNIFLVDKTCFSL*

>peptide 2 (36 aa)
RIEASREIAGTLAKSPNVQYIPGGQNMLLAMNPSRP*

>peptide 3 (51 aa)
MVLLLFSLLVVAGAYDLERGSTGCEFTYFYCIIIDGNFVMFETILCLGKRK*

>peptide 4 (29 aa)
MFFGVLLITNEWEVIFLVWILFQWELDVA*

Sequence

>CNT30607385
GAGGATTGAGGCATCAAGGGAAATTGCTGGAACCCTTGCTAAGTCACCCAACGTGCAATATATTCCTGGTGGACAAAACATGCTTCTCGCTATGAATCCA
TCTAGGCCATGATGTTTCAGGGATGAATACATACAGAATGGAATACATACAGAATGGAGATTTCGAACCTTCCAAGTAAAGAACTGTTACAATTAACGAA
TGAAGGAAGTAATAGATTTAGAAAGGAAGCAACGTAAAATAAACCAAATTTGATACCTTGCTGCTAAGGCAAAATTTGCCTCTGCCAATCTATGAGTCTC
TTCCTTATCGCGTATGGCATTGCCACTCCCTTTGGCAGCATCTACTAATTCAGAACTTAATTTGAAAGTGATACTTTGACTCAAATGTTTTTCGGGGTGC
TGCTAATAACCAACGAATGGGAAGTGATTTTCCTTGTATGGATCCTATTTCAATGGGAACTTGATGTAGCTTAGAAGTACGAATGCCTACAGTCATCTGC
TCTCCTCATAAATTTATAATATGTAATCGGGTTTTAACATCATTTAGTATTTTTTTTCTGTTTTGATTACATGGCTCATGCAATTATGATACCTTCATAG
AAGGCTGTATGTGTAATTCTACAATTTGTAATTCAGGCCTTATGGTGAAGATCGACTATGATATTTTACTGCTGTTTTAATGGTTCTGCTTTTGTTTTCC
CTTCTGGTTGTTGCAGGAGCTTATGACTTGGAACGAGGCTCGACTGGTTGTGAATTTACGTATTTTTATTGCATTATCATTGATGGGAACTTTGTGATGT
TTGAAACAATCTTATGTCTAGGAAAAAGAAAATAAAGTTTGAAGGACCATGCTTAGCTTTAAGGTGTTTTTGATGTCCAGTTGGAGAACATGTGCTTTTT
AGAATTAGATTACTAGTAGAAATCAGTGATTTTAGAACTTTAAAGATGGTTTTGATGCTAAATATATGTCCGCTTCTTATTGTTCCCAAAGTATTCCTTA
ATCTTACCATGTAAGGTTGCTTATTGATAATAAAATTCTTCGACGGTATCAGTTAA