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Detailed information on CNT30606537


BLAST search results

BLAST vs Swiss-Prot:
sp|A0ZZ43|RBL_GOSBA, E-value = 3e-155

BLAST vs NONCODE:
NONMEST005601, E-value = 1e-93

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690840Gossypium raimondiiOryza sativa42.2415.3781.69710forward
CNT30677554Gossypium raimondiiSetaria viridis9.3458.5887.9157forward
CNT30201083Gossypium raimondiiPisum sativum42.5933.5486.59716forward
CNT30181337Gossypium raimondiiSecale cereale42.2433.0181.83710forward
CNT30292770Gossypium raimondiiTriticum aestivum42.2452.2481.83710forward
CNT30225281Gossypium raimondiiHordeum vulgare12.6763.5883.1213forward
CNT30565170Gossypium raimondiiActinidia chinensis16.6624.5290.36280forward
CNT30541452Gossypium raimondiiBrassica napus42.3642.7187.08712forward
CNT30239038Gossypium raimondiiBrassica oleracea24.5733.1286.2413forward
CNT30554212Gossypium raimondiiOryza glaberrima22.7810.1582.51383forward
CNT30146680Gossypium raimondiiMedicago truncatula30.9941.5886.56521forward
CNT30444217Gossypium raimondiiAegilops tauschii22.7867.6781.46383forward
CNT30257373Gossypium raimondiiAvena sativa34.2186.681.91575forward
CNT3060115Gossypium raimondiiArabidopsis lyrata42.3630.0387.36712forward
CNT302912Gossypium raimondiiZea mays22.7847.8281.98383forward
CNT30627897Gossypium raimondiiDaucus carota18.1420.2787.87305forward
CNT30687498Gossypium raimondiiTriticum urartu32.9640.881.95554forward
CNT30477847Gossypium raimondiiArabidopsis halleri11.1885.4592.55188forward
CNT30622174Gossypium raimondiiCajanus cajan23.6254.5387.66397forward
CNT30355674Gossypium raimondiiLactuca sativa19.0443.3689.38320forward
CNT3058691Gossypium raimondiiAmborella trichopoda19.9374.9486.87335forward
CNT30100001Gossypium raimondiiOryza rufipogon14.5294.5782.79244forward
CNT30578317Gossypium raimondiiOryza barthii8.0928.183.82136forward

Expression of CNT30606537

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MINLTVITRAVTTIMNVFIRIISSRVFVYSSIFNKTKVAIH*

>peptide 2 (32 aa)
MLCKISIEKLEKRKFSPIKNLFRKISSTNTIQ*

>peptide 3 (31 aa)
MNSHSMKNQLNILFPIRIRILDTITKVINKQ*

Sequence

>CNT30606537
TTTGACGTCAACTAAATGATCAACCTTACTGTAATAACTAGAGCTGTCACTACAATCATGAATGTTTTTATCCGTATCATTTCTAGTCGAGTTTTCGTTT
ACAGTAGTATTTTCAACAAGACCAAGGTAGCTATCCATTAATTTACTTAGCCCACATCTTTATTCTAATTCTCCCTTAGACAAGATCAAATTGAACCATG
ATTTTTCCATAGAGCTTTCTTGCTTCTATTTGCATGAAAGTATAGTAGATGAATAGTCATTCGATGAAAAATCAATTGAATATTTTATTTCCTATCAGAA
TACGCATACTAGATACAATCACTAAGGTTATTAACAAACAATGAGTGAATATTGAAAGAAACGATTCTCTTTTGTGAGAACCTGGAGTAGCAGTTCATTA
TATATGATAGAGCTTTTTTTTCTTTTGAATTAGAAATATCAATTTTCAATTAGAAATAGTGATTTCCCCATGTTGTGTAAAATCAGCATTGAAAAATTGG
AAAAAAGAAAATTTTCTCCTATCAAGAACCTTTTTCGTAAAATCTCGTCTACTAATACAATACAATAAGTTTCTATTCCAACATGAAGCCAAAAGAACAA
CATACAAGATGGGTAGAAGTTGTGATGCTTGGCTCGATCCATGATCCGAAACCGTGGTATATAGGATAGAAAAGAATACACCAATCCTAAGGATCCATAC
ATAGGATTAATTATGGACCGAGGAGAAAATTTGAGTTGTGTTTAGTCTTTTATTTTTGTATTTAAGATCTTGTATATCTAGATAAAAATATATCTATAAA
AAAATATAGACAATAGAATCGGCTCAATCCTTTTAGTAAAATATTGGGTCGAGTATAATTGCAATTCAACAAACCGACAGTAATTACTGGATTACAAAGT
ATACATTGCTTCGAATTCAAATTTGATTTATCAAGCTGGTTTATCTAATTTATCCACTGCGTCAAATTCAAATTTGATCGCCTTCCATACTTCACAAGTA
GCACCTAGTTCAAGACTCCATTTGCTAACCTTGCGGATAATTTCATTACCCTCGCGGGCAAGGTTATGTCCCTCATTTTGAGCTTGTACACATGCTTCTA
AAGCTACTCGATTAGCTACGGCACCCGGTGCATTTCCCCAAGGGTGTCCTAAAGTTCCTCCACTGAATTGTAGTACGAAATCATCTCCAAAGATCTCGGT
CAAAGCAGGCATATGCCAAACGTGAGTACCCCCCGAAGATACGGGCAGAACACCTAGCATAGAAACCCAATCTTGAGAGAAATAAATATCACGGCTTCGA
TCTTTTCCAATAAAATCATCATGTAGTAAATCAACAAAGCCCAAAGTTATGTCCCTTTCTTCTTCAAGTTTACCTACTATTGTACCAATGTGAATATGAT
CTCCATCAGACATACATAAAGCTTTAGCTAGTACACGAAAGTTCATACCATGATTCTTCTGTCTATTAATAACTGCGTGCATTGCGGGATGGATGTGAAG
AAGTAAACCATTATCTCGGCAATAATGAGCCAAGCTAGTATTTGCAGTGAACCCACCTGTTAAGTAGTTGTGCATTATGATAGGAACTCCCAATTCTCTA
GCACACACGGTCCTTTTGATAATTTCTTCACATGTCCCTGCAGTAGCATTCAAGTAATGCCCTTTGATTTCACCTGTTTCA