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Detailed information on CNT30606338


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730571Gossypium raimondiiCorchorus capsularis26.4412.4692.48133forward
CNT30211757Gossypium raimondiiHelianthus annuus13.9225.6494.2970forward
CNT30624957Gossypium raimondiiDaucus carota28.639.0683.33144forward

Expression of CNT30606338

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MNLIFFFFFYSERSWKEVVNNKLPREMGKRNFHPTFIFIYKNL*

Sequence

>CNT30606338
GCATGATTTGATTTAGGTTTCTATCTATTATAGAATAGATAGAATATATAGATAGAAATGGATCTTGTTGTGTTCTGGAATCAAAGAAAGATAAGATGTT
GAAAAAGGCTCTTAGGTTGTAACTTGAAATAAATGTTTCTCTTTATCTAGAAAGGAATAGAATATTAATTTATTCTTAGGAACAAGAAGATTGAATCGGA
ACGTGGGATAAGGTAATCATGAAACTTTGACCAATGTACTTTGCTGTTCGGACTGTTTGGTGGCCATAATTCATGAACCCAGTTATCATAAGGAACATAT
CGTGAATATCTATGAATAATTTTATGTTTGTTTCTTTCTCTTGTTTGAACTAAGTCATGAATCTCATATTCTTTTTTTTTTTTTACAGTGAAAGAAGTTG
GAAAGAAGTTGTTAATAATAAATTACCGAGAGAAATGGGTAAAAGAAATTTCCACCCGACATTTATATTTATTTATAAAAACTTATGACTAATAAGTATG
GAC