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Detailed information on CNT30605785


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521912Gossypium raimondiiSetaria italica6.520.9387.572reverse complement
CNT30535895Gossypium raimondiiEucalyptus grandis25.9351.8188.5287forward
CNT30730672Gossypium raimondiiCorchorus capsularis20.6922.8893.01229forward
CNT30508142Gossypium raimondiiNicotiana attenuata20.2351.2685.27224reverse complement
CNT30161394Gossypium raimondiiPistacia vera10.7555.3586.55119forward
CNT3095993Gossypium raimondiiSolanum tuberosum25.847.1584.27286forward
CNT30183931Gossypium raimondiiSecale cereale10.2133.6385.84113reverse complement
CNT30309092Gossypium raimondiiTriticum aestivum9.331.8990.29103reverse complement
CNT30149007Gossypium raimondiiBrachypodium distachyon8.5829.1486.3295reverse complement

Expression of CNT30605785

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MNHEMLWFYNMILKIYSEVIRGIMHSFSFLVIMKKSTTG*

>peptide 2 (41 aa)
FYYYVTKYRNIFKTKMLMVPDYWLIENQSRCTNESRNAMVL*

Sequence

>CNT30605785
CTTTCTACTACTATGTTACTAAATACAGAAATATTTTCAAAACAAAAATGTTAATGGTCCCAGATTATTGGTTAATAGAGAATCAAAGTCGATGTACCAA
TGAATCACGAAATGCTATGGTTCTATAATATGATTTTAAAAATTTATTCAGAAGTAATTCGCGGGATCATGCACTCTTTTTCTTTCCTAGTTATAATGAA
AAAAAGTACAACTGGGTGAATCCAGCTTATTCTTGAAATAACAACTCGTACACACTCACTTTCCAAAAAAGATACAATACACCAAGGACTACACTTAGAT
TTATTGGATTTGTTGCTAAAATATCGGTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGACGCCAAGTGTGTCTAGATTCAGGAGTTCCCGCTATAGCCACTTGGTGTCATGATGATATAGGGC
CTTGGTCAGTTCTAATATTTAACGAATTAGTTGCCCTATTGTCGGTATTAACCCCATAACTCCCGAAGGATGGTCATATACCCAAGGAAATAAAAGAATC
GGTTACATTTTTCATATGATCTCCTATTTTATTTTAGATAGACTAAAAAAAAAGAACTCGGTTCTTTCTTTTTGTATTATATCGCTTTGACTCCTTTTCC
ATTTATTCTATTCTATTTATATTATTCTAATTATTCTAATTCTATGTATTTCTTTTTTTGTTTTAATAAATTATTAAATTTATTATAAAATTATTCATTA
TTATGATTATGAATTTTCATTTACCTATGTCTAAACGGAGTTAAAAATATATTCTATTTATCTAGCTAGAAATGTATTTTTTTTTTTTCAATTGAAAATT
CCCAATAATAATAATTCTTATTAGAATTAGGGGGCAGGTTTCATGTCAATGGCAAAATACCTCATTTGTTGCAACACTCCTTTAAACAATAAATAAGAAA
TAAGTAAACAAGAAATTAAGAAATAAGGGGGTTCTCTTGAACTAAGAAGGGGAAGGGAAGAAAGCGAGTCGGGGGTGATAATTCCTCATCCTCAAATTAA
TCCTTCC