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Detailed information on CNT30605652


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-146

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701241Gossypium raimondiiQuercus lobata89.8686.3583.18886forward
CNT30500417Gossypium raimondiiCoffea canephora88.8443.581.62876forward
CNT30615967Gossypium raimondiiSesamum indicum92.4927.1281.36912forward
CNT30156153Gossypium raimondiiPistacia vera9379.684.73917forward
CNT3094992Gossypium raimondiiSolanum tuberosum92.778.5282.93914forward
CNT30538027Gossypium raimondiiBrassica napus90.0646.8482.55888forward
CNT30511508Gossypium raimondiiSolanum lycopersicum90.2668.0482.47890forward
CNT30311134Gossypium raimondiiCamelina sativa90.0665.283.33888forward
CNT3079055Gossypium raimondiiBrassica juncea89.6681.6383.26884forward
CNT30626303Gossypium raimondiiDaucus carota92.739.6481.73914forward
CNT30423866Gossypium raimondiiPapaver somniferum92.4971.3182.35912forward
CNT30120072Gossypium raimondiiCitrus clementina81.5469.1384.2804forward
CNT30111771Gossypium raimondiiFicus carica89.3570.7182.07881forward

Expression of CNT30605652

Peptides detected in this lncRNA

>peptide 1 (35 aa)
AKHHEIKRKQDNTKGRMVNRTQIRNHHGGEGQDAE*

Sequence

>CNT30605652
GGCTAAACATCATGAAATAAAAAGAAAACAAGACAACACCAAAGGCAGAATGGTTAACAGGACCCAAATCAGAAACCACCACGGAGGCGAAGGACAAGAT
GCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCGTCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCC
CTCCTTGTCCTGAATCTTTGCTTTTACATTGTCAATCGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCTGTGAGGGTCTTCACAAAAATTTGC
ATACCACCACGAAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTCCCAGCAAAAA
TTAACCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCCACCTCTAAAGTGATGGTTTT
TCCAGTGAGCGTTTTTACAAAGATCTGCATGCCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTTTGAATGTTGTAGTCAGCAAGGGTGCGA
CCATCTTCAAGTTGCTTACCGGCAAAGATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCTTTATCCTGGATCTTAGCCTTGACATTATCAATTGTGTCAG
AGCTTTCAACCTCAAGGGTGATTGTCTTGCCAGTAAGGGTTTTTACGAAGATCTGCATGCCACCCCTGAGACGAAGGACAAGGTGGAGGGTGGACTCCTT
TTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCTTGGATC
TTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTCACAAAGATCTGCAT