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Detailed information on CNT30605389


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-155

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532219Gossypium raimondiiEucalyptus grandis88.0351.6182.83868forward
CNT30279009Gossypium raimondiiChenopodium quinoa90.5758.4482.87893forward
CNT30727227Gossypium raimondiiCorchorus capsularis63.1854.2284.11623forward
CNT30379426Gossypium raimondiiManihot esculenta92.678.8483.57913forward
CNT30525184Gossypium raimondiiPhaseolus vulgaris92.958.4983.41916forward
CNT30629220Gossypium raimondiiVigna unguiculata90.2682.4183.03890forward
CNT30200107Gossypium raimondiiPisum sativum85.0994.782.48839forward
CNT30635938Gossypium raimondiiCapsicum annuum92.85182.62915forward
CNT3086353Gossypium raimondiiVigna radiata91.1841.9583.2899forward
CNT30238962Gossypium raimondiiBrassica oleracea91.1846.5182.76899forward
CNT30145547Gossypium raimondiiMedicago truncatula89.4544.3283.67882forward
CNT30429148Gossypium raimondiiPapaver somniferum89.6665.9282.47884forward
CNT3024139Gossypium raimondiiPopulus trichocarpa90.4783.0582.85892forward
CNT30330398Gossypium raimondiiDioscorea rotundata92.0996.781.28908forward
CNT30724005Gossypium raimondiiLupinus angustifolius88.1367.3183.66869forward

Expression of CNT30605389

Peptides detected in this lncRNA

>peptide 1 (35 aa)
AKHHEIKRKQDNTKGRMVNRTQIRNHHGGEGQDAE*

>peptide 2 (30 aa)
MVFPVSVFTKICMPPLRRRTRWRVDSFWML*

Sequence

>CNT30605389
GGCTAAACATCATGAAATAAAAAGAAAACAAGACAACACCAAAGGCAGAATGGTTAACAGGACCCAAATCAGAAACCACCACGGAGGCGAAGGACAAGAT
GCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCTAGAGTTCGACCGTCCTCCAACTGCTTCCCAGCAAAGATCAACCTCTGCTGATCCGGGGGAATTCC
CTCCTTGTCCTGAATCTTTGCTTTTACATTGTCAATCGTATCAGAACTCTCAACTTCCAAGGTAATAGTCTTTCCTGTGAGGGTCTTCACAAAAATTTGC
ATACCACCACGAAGACGCAACACCAAATGGAGGGTAGACTCCTTTTGAATGTTATAGTCTGCAAGGGTTCTGCCATCTTCAAGCTGTTTCCCAGCAAAAA
TTAACCTCTGCTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTAACGTTATCAATTGTATCAGAACTCTCCACCTCTAAAGTGATGGTTTT
TCCAGTGAGCGTTTTTACAAAGATCTGCATGCCACCCCTAAGACGAAGGACAAGGTGGAGGGTAGACTCTTTCTGGATGTTGTAGTCAGCAAGGGTGCGG
CCATCCTCCAGTTGTTTACCAGCAAAGATAAGCCTCTGTTGGTCAGGAGGGATACCTTCTTTGTCTTGGATCTTGGCCTTGACATTATCAATTGTGTCGG
AGCTTTCCACTTCAAGGGTGATTGTCTTGCCAGTAAGGGTTTTGACAAATATTTGCATGCCACCCCTGAGACGAAGCACAAGGTGGAGGGTGGACTCCTT
TTGGATGTTGTAGTCAGCAAGGGTACGGCCATCCTCAAGCTGTTTCCCGGCGAAGATAAGCCTCTGTTGGTCAGGGGGGATCCCTTCCTTGTCTTGGATC
TTGGCCTTGACATTATCAATTGTGTCGGAGCTTTCCACCTCGAGGGTGATGGTCTTACCAGTAAGAGTTTTCACAAAGATCTGCAT