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Detailed information on CNT30605136


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550185Gossypium raimondiiIpomoea triloba19.9520.0995.2985forward
CNT30592654Gossypium raimondiiMusa acuminata24.184.0888.35103forward
CNT30627905Gossypium raimondiiDaucus carota54.239.289.61231forward

Expression of CNT30605136

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MRIRLKLSFFDRNTDKIRKAIIGANDAIASVRAKPK

>peptide 2 (40 aa)
MSHKVNFEPQRQANGHFRGLARFPLLKKGNCPVLFHVESF*

Sequence

>CNT30605136
TCCACTACCGAGCAGGGGCAAAAATACGATAAGTAGATACATAATTTCGAGTGTGATCAGACAACCAAAAATCAGACAATGACAGAGCGGCCTGTGATGG
AGTGATAGATTGATCGACGTCCGGAGAACGCTCGATCGAAGGAATGAGTCACAAGGTCAATTTTGAGCCCCAACGACAAGCGAACGGGCATTTTCGGGGA
CTAGCCCGCTTCCCATTACTCAAGAAGGGCAATTGTCCGGTCCTCTTTCATGTGGAATCGTTTTAGATCGTACCCAAGCCCGCCTCCACTTTCTTATGTG
AAAGAGGTGCTTGCTTTATGAGAATTAGACTGAAACTTTCTTTCTTCGATCGGAATACGGATAAGATCAGAAAGGCCATCATTGGGGCAAACGATGCAAT
AGCTTCGGTTAGAGCAAAGCCCAAAA